Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0157 ATGGCTGCTTCCCATGTTGGTCTCCAACCAACCACTCATCTATTCTGTCATGCAATGCGAATCATTTTGTTGTTCCATATCATTACTTCAGTATATCCACTTTCATTTAATTACCAGGGCTTTGAGTATGATGATACCAAGCTAGAAGGTGATGCTTCTCTGTTACATTCATACATCCAACTCACAACAACCTCAAGGTACCAAAGCAATGCATTCAGCGTCGGACGAGCAAAGAGTTTCGAGCAATTGTATCTGTGGAACAGAAGCTCAGGAAAACTCACTGACTTCACTACCCAATTTTCCTTCATCATTTTCTCAAACGAAACTCGTTTTGGGGATGGCTTGGCATTTTTCTTTGCAGATCCAGAACTGCCACTACCAAGGCATATACAAGAAGGAGGTGGTCTTGGCCTAGTAGATGATGACCAAATATTGAACTCAACCAAACATTCATTTGTAGCAGTGGAGTTTGACACACACAGAAATTCATGGGATCCCCGAACCCAAGGCACTCATGTAGGTATAAATTTCAATTCTATGAGATCAGACGTATCTGAGCCATGGTCGATTGATATTACGCAAAAGAAAGCTTATAATTGCAGAATTGAGTACAATTCTAGTACACATAATCTGGAAGTTTCTTTCACTGGAAACATGAAAAAAGGTAAGCCAGTAAGAACTTATATCTCATATAATGTTGATTTGAGAGATTACCTACCAGAGTGGGTTGTTTTTGGCTTCTCTGCTGCTACAGGATACATGTTTGAGATGAATATCCTGCAGTCATGGTCATTCAATTCAAGTTTACAAAGTAATAAGAGTGTGTCAAGTCATAAACCTCCAATGGCAGCCTCACCAAATCCCAATCCTTCACCAATTTCCACAGCTAAAAGTATCAGCAACAAAGGTTTATTACCAGTAGTGCTAGGGGTTGGTATAGGTGTGTCTACATTTTTCCTTATTTTAGGGTGTGTTTATATTTTCATGTGGAAAAGGGCTGGATGGAAAAGAGAAGATTCAATTTTTGACCTGGAACTGGATGATGAATTCCAAAAGGGCACTGGACCTAAGAGGTTTTGTTATAATCAATTGGTGAGTGCAACAAACAACTTTGCAGAAGGAAGGAAGGTTGGACAAGGAGGTTTTGGTGGTGTTTATAAAGGCTATCTCAAAGACATAAAATCCAATGTTGCTATAAAGAGGGTATCAAGAGAGTCTAAGCAGGGGATAAAGGAATATGCAACTGAAGTGAAGATCATTAGCCAGCTGAGGCATAGGAATTTGGTACAGCTAATTGGTTGGTGCCACAGGAATAAAGATCTCCTCCTGATATATGAGCTCATGGAAAATGGTAGCTTAGATTTCCACCTACATCGCGGAAAAAGCATATTGACATGGCAGAGGAGGTACAACATCGCCATGGACTTGACTTTGGCGCTGCTGTACCTGCATGAAGAATGGGAGCGATGTGTGCTTCACAGGGACATTAAAACAAGCAACATCATGTTGGACTCCAATTTCAATGCTAAACTTGGGGATTTTGGCTTAGCTAGGCTTGTGGATCATGAGAAAGGTTCACAAACCACAGTTATAGCCGGAACCATGGGCTACATAGCTCCTGAATATCTCACTACAGGGAGGACTACAAAGGAGTCTGACATGTACAGCTTTGGGATTGTTATATTGGAGTTAGCCAGTGGGAGAAAATCAATTGACCTCAAGGCCAAGGAGGATCAAATAGCCATATTTGAGTGGGTTTGGGAGCTCTATAGATTAGGAAGATTCCTTGAAGCAGTAGATCCAAAGCTTGAAGGAGTATATGATAAGGAGCAACTGGAACGTTTAGTGGTGGTTGGTCTTTGGTGTGCAAATCCAGATTATTCATTCAGACCATCAGTAAGGCATGTGATTCAGGTGCTTAAATTTGAAACCCCTTTACCAGTTCTCCCACAGATGATTCCAGAGCCAACTTCCAATCGTCCAACAATGAGTTCATTTTTTGGTTCTATTTCTTATAATTCTGAGGCTACACTTTAG 2037 0.408 MAASHVGLQPTTHLFCHAMRIILLFHIITSVYPLSFNYQGFEYDDTKLEGDASLLHSYIQLTTTSRYQSNAFSVGRAKSFEQLYLWNRSSGKLTDFTTQFSFIIFSNETRFGDGLAFFFADPELPLPRHIQEGGGLGLVDDDQILNSTKHSFVAVEFDTHRNSWDPRTQGTHVGINFNSMRSDVSEPWSIDITQKKAYNCRIEYNSSTHNLEVSFTGNMKKGKPVRTYISYNVDLRDYLPEWVVFGFSAATGYMFEMNILQSWSFNSSLQSNKSVSSHKPPMAASPNPNPSPISTAKSISNKGLLPVVLGVGIGVSTFFLILGCVYIFMWKRAGWKREDSIFDLELDDEFQKGTGPKRFCYNQLVSATNNFAEGRKVGQGGFGGVYKGYLKDIKSNVAIKRVSRESKQGIKEYATEVKIISQLRHRNLVQLIGWCHRNKDLLLIYELMENGSLDFHLHRGKSILTWQRRYNIAMDLTLALLYLHEEWERCVLHRDIKTSNIMLDSNFNAKLGDFGLARLVDHEKGSQTTVIAGTMGYIAPEYLTTGRTTKESDMYSFGIVILELASGRKSIDLKAKEDQIAIFEWVWELYRLGRFLEAVDPKLEGVYDKEQLERLVVVGLWCANPDYSFRPSVRHVIQVLKFETPLPVLPQMIPEPTSNRPTMSSFFGSISYNSEATL* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0157 678 CDD STKc_IRAK 377 641 - -
Lja1g0157 678 Gene3D Phosphorylase Kinase; domain 1 356 447 - -
Lja1g0157 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Lja1g0157 678 Gene3D - 33 281 - -
Lja1g0157 678 ProSiteProfiles Protein kinase domain profile. 371 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0157 678 ProSitePatterns Protein kinases ATP-binding region signature. 377 400 IPR017441 GO:0005524
Lja1g0157 678 Pfam Protein kinase domain 372 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0157 678 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Lja1g0157 678 CDD lectin_legume_LecRK_Arcelin_ConA 34 269 IPR001220 GO:0030246
Lja1g0157 678 MobiDBLite consensus disorder prediction 274 293 - -
Lja1g0157 678 Gene3D Transferase(Phosphotransferase) domain 1 448 667 - -
Lja1g0157 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 271 IPR013320 -
Lja1g0157 678 Pfam Legume lectin domain 34 277 IPR001220 GO:0030246
Lja1g0157 678 PANTHER LECTIN RECEPTOR KINASE 21 676 - -
Lja1g0157 678 PANTHER - 21 676 - -
Lja1g0157 678 SMART serkin_6 371 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g0157 678 SUPERFAMILY Protein kinase-like (PK-like) 355 658 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0157 Lja-Chr1 1364970 1367014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0157 22 657 Receptor kinase-like Gene Family AT5G10530 43.951 1.96e-166 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja1g0157 Pkinase 1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0157 - - gmx:100814713 963.755