Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0151 ATGATATATTATGCCGATGATGCAAGGTTTCAGATAGGATCAGCACATGGAAGATTCATTCTTCCTCCTAAAGATTTTTCAAACACACAGTTTAGAGGGCTTAAGGTTGTGTTAGCCGATGATGATGACGTAAACAGAACCTTGACTAAGAAGCTGCTTGAGAAGCTGGGTTGTCAAGTAACTGCTGTTTCATCAGGTCTTGAATGTCTAGGTGTCAAGATTATCCTGTTGGATCTTCACATGCCTGAAATGGATGGTTTTGAAGTTGCAAGAAGGATAAGGAAGTTCCAGAGCAGAAACTGGCCCTTGATTATTGCGCAAACAGCAAGTGCAGAAGAACACATAAAGGAAAGATGCCTGCAGGTGGGGACGAATGGATTGATTCGAAAACCTGAAGTTGCTACGTGCAGGTGA 414 0.4251 MIYYADDARFQIGSAHGRFILPPKDFSNTQFRGLKVVLADDDDVNRTLTKKLLEKLGCQVTAVSSGLECLGVKIILLDLHMPEMDGFEVARRIRKFQSRNWPLIIAQTASAEEHIKERCLQVGTNGLIRKPEVATCR* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0151 137 PANTHER ETHYLENE RECEPTOR 9 133 - -
Lja1g0151 137 SUPERFAMILY CheY-like 30 131 IPR011006 -
Lja1g0151 137 SMART REC_2 34 136 IPR001789 GO:0000160
Lja1g0151 137 Gene3D - 23 136 - -
Lja1g0151 137 Pfam Response regulator receiver domain 36 131 IPR001789 GO:0000160
Lja1g0151 137 PANTHER TWO-COMPONENT HISTIDINE KINASE 9 133 - -
Lja1g0151 137 ProSiteProfiles Response regulatory domain profile. 35 137 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0151 Lja-Chr1 1310259 1311310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0151 27 131 Miscellaneous Gene Families AT3G04580 64.602 9.98e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lja1g0151 Response_reg 1.5e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0151 K14509 - gmx:100805023 218.394