Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0130 ATGATATGTAACACCATATTAGCACCTCATTCATCTGCATCTCTAAGCAAAGGTTTCCTTTTACACACAATGAAAACCAGAAGCTTATTGTTTCTTTCATCACACATTTTCAGCCTCTCAATCTGGTCATTGTTATTATGCTATTCATCTGCTTTATCAGAGAGGAGCACCTACATAGTCCACATGGACAAGACTCACATGCCTGAGGATTTCACCTCCTATCACCACTGGTATTCATCCACCATTACTTCCCTTAACTCAATTTCCACCTCTTTACATAACAATGACAACAACAAAGCACCCTCCATTCTTTACTCTTATGACAATGCACTTCATGGCTTCTGTGTTACCTTGTCACCAGAGGAATTAGAGATGCTGAAACAAACCCCAGGTTTCATCTCAGCATATAATGACAGAGCAGCTACACTTGACACCACCCAGACTTATGAGTTCCTCTCTCTCAACCCTTCCAATGGCCTCTGGCCTGCTTCCAACTACGGCGAAAACGTCATCGTTGGCATCGTCGACTCCGGAATTTGGCCGGAGAGTGAAAGTTACAAAGACCATAGCATGACAACAGAAGTTCCTTCCAAGTGGAAGGGAACATGCGAGGCTGGACAAGAATTTGATCCCTCATTATGTAACTCCAAGCTCATAGGAGCAAGACACTTCAACAAGGGTGTTCTTGCTGCACAAGGTAATGAACATGCTAAAGTTGGCATGAACTCGGTTAGAGACACCATGGGACACGGGACTCACACTTCCTCCACAGTCGCCGGCAACTATGTGAATGGCACATCTTATTTTGGTTATGCTAATGGCACAGCCAGAGGAATTGCACCAAGAGCAAGGTTAGCTATTTACAAGGTTTCATGGCCTGAAGGGTCACACTCCTCTGACATTCTTGCAGGCATGGATCAAGCAATTGCTGATGGGGTGGATGTGATTTCAATCTCAATGGGGTTTGATAAGGTGCCTTTGTACGAGGATCCAGTAGCAATAGGTGCTTTCTCTGCCATGGAGAAAGGTGTGGTGGTTTCAGCTTCAGCAGGAAACTCTGGTCCAGCCCTTGGATCCTTACACAATGGGATTCCTTGGGTTTTAACAGTTGGAGCAAGCAACACTGAGCGTTCTTTTGGGGGCACTTTGGTTCTTGGAAATGGGAAGAGCTTTGTGGGGTGGACACTTTTCCCAGCAAGTGCCACAGTGAATAAACTTGCTCTAGTTTACCATAAAAACATTTCAGCATGTGACTCCTCTGAGCTTTTATCACAGTTAGGACGTAAAAGCATTGTTGTATGTGATTCAATAAAGCATGTTGCAAAGCAGATTCGTCATGTGACGGAGTCTCAAGTGTATGGAGCTATATTCATGTCCAGTGATTCTAGACTCACTGAAAGGGGAAAATTAACAATGACATGCCCTGGTGTTGTGATTAGCCCTGAAGATGGAAAAAGTGTGATCGAATATGTAAAAACGACAATACACCCTTTGGCAACAATAAAGTTTCAACAAACGTTTGTTGGAACAAAGCATGCTCCAATTGTGGCTAGCTACAGTTCAAGAGGCCCTTCTTGGGGGTGTCCTTCTGTATTGAAGCCTGATGTGATGGCACCAGGATCATCAATTCTTGCTGCTTGGATTCCAGATTCACCTGCTGCTCAGATTGGCTCAAATGTGTTCTTGAGCAGTGAATACAATTTGTTAACTGGAACTTCCATGGCTTGTCCTCATGCTTCTGGGGTAGTGGCTCTATTGAAAAATGCACACCCTGAATGGAGTGTTTCTGCTATTATTTCTGCACTTATAACCACAGCAAACCCACTTGATAACACTGGAAAACATGTTGAAGAGAATGGTTACTATGATCCTCCTCAACCAGCTTCTCCTCTGGCTATGGGAGCTGGTCAGATTAATCCTAATAGAGCTCTTGATCCTGGTTTGATTTATGATGTGACACCTCAAGATTATGTCAACCTTTTATGTGCCATGAACCTCACAAAAAGCCAAATTTTATCCATCACTAGATCAAAAGGCTATAATTGCTCAATTTCAGTGTCATCTTATGATTTCAATTGCCCATCTTTCATAGATTTCTATGTCAATGAGAGTGTAACTGGGGAGAGAAAATTCAGGAGAACTGTGACCAATGTTGGAGATGGTCCTGCAGTTTACATGGCCAGGGTGAACGTGTCAAATGATTCAGCAATCACTGTTTCTCCTAATAAGCTGGTTTTCAAGAGAAAATATGAGAAACTGAGCTTCACTTTGACATTGAAGCACTCTCAAATGGAGAAGAAACATAGTGTAGCTTCTGGTGCACTTGAGTGGGTTGAAGAAACTGGAAGATATACTGTTAGGAGTCCTATTGTGGTGGTACCAGAGAATGTTGTCTTCAACTCAGAAACAGAAGGTGGGGTTTAA 2424 0.4303 MICNTILAPHSSASLSKGFLLHTMKTRSLLFLSSHIFSLSIWSLLLCYSSALSERSTYIVHMDKTHMPEDFTSYHHWYSSTITSLNSISTSLHNNDNNKAPSILYSYDNALHGFCVTLSPEELEMLKQTPGFISAYNDRAATLDTTQTYEFLSLNPSNGLWPASNYGENVIVGIVDSGIWPESESYKDHSMTTEVPSKWKGTCEAGQEFDPSLCNSKLIGARHFNKGVLAAQGNEHAKVGMNSVRDTMGHGTHTSSTVAGNYVNGTSYFGYANGTARGIAPRARLAIYKVSWPEGSHSSDILAGMDQAIADGVDVISISMGFDKVPLYEDPVAIGAFSAMEKGVVVSASAGNSGPALGSLHNGIPWVLTVGASNTERSFGGTLVLGNGKSFVGWTLFPASATVNKLALVYHKNISACDSSELLSQLGRKSIVVCDSIKHVAKQIRHVTESQVYGAIFMSSDSRLTERGKLTMTCPGVVISPEDGKSVIEYVKTTIHPLATIKFQQTFVGTKHAPIVASYSSRGPSWGCPSVLKPDVMAPGSSILAAWIPDSPAAQIGSNVFLSSEYNLLTGTSMACPHASGVVALLKNAHPEWSVSAIISALITTANPLDNTGKHVEENGYYDPPQPASPLAMGAGQINPNRALDPGLIYDVTPQDYVNLLCAMNLTKSQILSITRSKGYNCSISVSSYDFNCPSFIDFYVNESVTGERKFRRTVTNVGDGPAVYMARVNVSNDSAITVSPNKLVFKRKYEKLSFTLTLKHSQMEKKHSVASGALEWVEETGRYTVRSPIVVVPENVVFNSETEGGV* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0130 807 Pfam Subtilase family 167 609 IPR000209 GO:0006508|GO:0008236
Lja1g0130 807 Pfam Fibronectin type-III domain 690 792 IPR041469 -
Lja1g0130 807 ProSiteProfiles Serine proteases, subtilase domain profile. 148 644 - -
Lja1g0130 807 CDD Peptidases_S8_3 142 607 IPR034197 -
Lja1g0130 807 CDD PA_subtilisin_like 382 501 - -
Lja1g0130 807 Pfam Peptidase inhibitor I9 57 141 IPR010259 -
Lja1g0130 807 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 46 144 IPR037045 -
Lja1g0130 807 PRINTS Subtilisin serine protease family (S8) signature 570 586 IPR015500 -
Lja1g0130 807 PRINTS Subtilisin serine protease family (S8) signature 246 259 IPR015500 -
Lja1g0130 807 PRINTS Subtilisin serine protease family (S8) signature 167 186 IPR015500 -
Lja1g0130 807 ProSitePatterns Serine proteases, subtilase family, serine active site. 571 581 IPR023828 -
Lja1g0130 807 Gene3D Peptidase S8/S53 domain 169 657 IPR036852 GO:0004252|GO:0006508
Lja1g0130 807 SUPERFAMILY Subtilisin-like 145 648 IPR036852 GO:0004252|GO:0006508
Lja1g0130 807 Gene3D - 376 508 - -
Lja1g0130 807 Gene3D - 661 794 - -
Lja1g0130 807 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 48 793 IPR045051 -
Lja1g0130 807 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.9 48 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0130 Lja-Chr1 1087935 1090946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0130 32 792 Subtilisin-like Serine Gene Family AT5G67360 42.288 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0130 - - gmx:100791444 1064.68