Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0091 ATGATAATCAAGGAGATTCTGGATGCTGAAATGCAGCACCTGAAGAGGGGTAAGCTAGAGGAACAAGAGAACTGTGCCTCTGAGCATTCGCCGATTACGAAGAAGCAGAGGGTGGACGGTGATGAAGATTTCACCAGTGAAGGACAGAATCCGAATCCTATGGAGTTGAATGCTGCTCGTGAAAATGCGCCTCCGTTGTTGCGTTCATCGAGAGGTCGCGCTCGGGTTCTTCCATCCAGGTTCAGGGATTCAGTTATTGATAGTAATAGTTTGCGAGGTGTTGAAATGGGATCTGTGAAGCAGGGAGGGAAGAGGAGTGAATGTGGCTCTGAAAATTCTCTTGCTAACAAGTTTAAGAGCATTAGAACGACGGTTACTGGGGGTCGTTCATTGTTGGTGAAAACGGAGAGTGATAATGGAAATGGAAAAAAGAGGAAGGAAACTTTCAAGCCAGAGGATTTTGCTTTGGGTGATGTGGTTTGGGCAAAATGTGGGAAGCAATATCCTGCATGGCCTGCAGTGGTGATTGATCCCATGTCACAAGCTCCTGAATCGGTCCTCAACTGTTGTGTTCCTGGTGCAACTTGCGTCATGTTCTTTGGTTATTCAAATAACGAAAAGCAAAGGGATTATGCATGGGCGAAGCAGGGGATGATATTCCCCTTCTTGGAATTCATGGATAGATTTCAGGGGCAGACCCAATTATTCAAGAGCAAGCCAAGTGAGTTTCAAGCGGCAATGGAGGAGGCAATGCTAGCAGAAGAAGGCATTCTGGACTCACACTTGGAGGGTGCACGGTCCTATGTTGATCAGGAACATCACTGTGAAAACCAGGAGACAACGTCTTGCGCTGGTTGTGGTTTGATGTTGCCGTACAAAAGCATGAAAAAGATTAAGGATTCAAGCTGTGCTCCTCAGTATTATTGTAAACCTTGTGCAAAGTTACTAAAATCAAAACAATGTTGTGGCATTTGCAAAAAGATTTGGCAGTGGCACCATTCAGATGGTGGAAGTTGGGTATGCTGTGATGGTTGCAATGTTTGGGTGCATGCGGAGTGTGACAAAATTTCCAGCAAACTTTTCAAGGATCTGGAAAATATGGAATACTATTGCCCAGAATGCAGGGGAAAGTTTAATTGTAAATTATCAGCAGCACAAACACCACAAATTAAGTCAATGGATAATAGCCAAAAACCTGTGCTACCGGAAAAGCTAGCGGTGGTGTGTAATGGCATGGACGGAGTTTATATTCCAGAGCTTCATTTAGTTATGTGTAAGTGTGGGTCATGTGGTTCAAGGGAGCATACACTCACTGAATGGGAGCGGCATGCAGGTTGCAGAGCCAGAAAATGGAAATATAGTGTGAAAATAGCAAACACAAAGCAACCACTAATAAAATGGATCTCAGAACATAATTCTCAACCTGGAAATTTCCTGCAGTTAGATCAGAAACAAGTGCTTTCGTTTTTGCAAGAGAAGTATGAGCCAGTTTATGCAAATTGGACAACAGAAAGATGTGCCATTTGCAGATGGGTTGAAGATTGGGAAGATAACAAAATTATTATCTGTAACAGGTGCCAAATTGCAGTCCACCAAGAGTGCTATGGAGCAAGGAATGTTCAAGATTTTACTTCCTGGGTTTGTAGAGTCTGTGAAACTCCTGATGTTGAACGAGAGTGTTGCCTCTGTCCAGTAAAAGGTGGTGCACTAAAGCCTACTGACGTGGAGATGTTGTGGGTTCACGTGACATGTGCTTGGTTTCGGCCTGAAGTTATTTTCAGAAACCATGAGGCGATGGAACCTGCCTCTGGAATTCTTAAGATTCCTCCCAATTCCTTTTTGAAGACTTGTGTAATCTGTAAACAAAGCCATGGTTCCTGTACAAGTTGTTGCAAGTGTGCTACATATTTTCATGTGATGTGCGCGTCAAGAATGGGGTATAGCATGGAATTAAATTCGACAGAGAAGAATGGGACTCAAAGAATGCTAATATACTGTGCAGTTCACAGGGTCCCAAATCCAGATTCTGTACTGGTTGTGCGTACACCCCAAGGGGTATTCTCTCCAAGAACTTCGCTTCGAAATCACAAGGGATGCTTTAGTGGTTCAAGTTTGGTTTCATCAAAGGATATGGAGCTCCTTGAACCTCCAACCTCTGAAAGTTATGATGTTGAGCCTCTATCTGCTGCCAGGTGTCGTGTGTACATAAGGTCTCCCAGTAAGAAGAGAGATGCAGCAGTAATGCACTTGCTTGGGGGGCCGAACCTTCATTCTTTAAATGCAATAACTCAATTGAACAGCAATAAGGTTGCTGAAGTGTTTTCTTCTTTCAAGGAACGTCTGCACCATTTACATAAAACTGAAAACCACAGAGTTTGCTTTGGAAAATCAAGTATTCATGGATGGGGCCTCTTTGCTCGTAGAGATTTGCAAGAAGGAGAAATGGTTGTTGAGTATCGTGGTGAGCAGGTAAGGCGTAGTGTTGCTGATCTGAGGGAAGCAAAGTACCATTCAGAAGACAAAGATTGTTATCTCTTCAAGATTAGCGAGGAAGTGGTAATTGATGCAACAGATAAGGGCAATATTGCACGTTTAATAAACCATTCTTGCATGCCAAACTGCTATGCAAGGATTATGTGTTTGGGTGATCATGAGAACCGGATTGTTCTTATTGCCAAGACCAATATTTCTGCTGGTGAAGAACTAATGTATGATTACTTGTTTGATCCGGATGAGCGGGAGGGACGCAAGGTTCCCTGCCACTGCAAAGCCCCTGATTGTAGGAAATTTATGAACTAG 2799 0.4344 MIIKEILDAEMQHLKRGKLEEQENCASEHSPITKKQRVDGDEDFTSEGQNPNPMELNAARENAPPLLRSSRGRARVLPSRFRDSVIDSNSLRGVEMGSVKQGGKRSECGSENSLANKFKSIRTTVTGGRSLLVKTESDNGNGKKRKETFKPEDFALGDVVWAKCGKQYPAWPAVVIDPMSQAPESVLNCCVPGATCVMFFGYSNNEKQRDYAWAKQGMIFPFLEFMDRFQGQTQLFKSKPSEFQAAMEEAMLAEEGILDSHLEGARSYVDQEHHCENQETTSCAGCGLMLPYKSMKKIKDSSCAPQYYCKPCAKLLKSKQCCGICKKIWQWHHSDGGSWVCCDGCNVWVHAECDKISSKLFKDLENMEYYCPECRGKFNCKLSAAQTPQIKSMDNSQKPVLPEKLAVVCNGMDGVYIPELHLVMCKCGSCGSREHTLTEWERHAGCRARKWKYSVKIANTKQPLIKWISEHNSQPGNFLQLDQKQVLSFLQEKYEPVYANWTTERCAICRWVEDWEDNKIIICNRCQIAVHQECYGARNVQDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPEVIFRNHEAMEPASGILKIPPNSFLKTCVICKQSHGSCTSCCKCATYFHVMCASRMGYSMELNSTEKNGTQRMLIYCAVHRVPNPDSVLVVRTPQGVFSPRTSLRNHKGCFSGSSLVSSKDMELLEPPTSESYDVEPLSAARCRVYIRSPSKKRDAAVMHLLGGPNLHSLNAITQLNSNKVAEVFSSFKERLHHLHKTENHRVCFGKSSIHGWGLFARRDLQEGEMVVEYRGEQVRRSVADLREAKYHSEDKDCYLFKISEEVVIDATDKGNIARLINHSCMPNCYARIMCLGDHENRIVLIAKTNISAGEELMYDYLFDPDEREGRKVPCHCKAPDCRKFMN* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0091 932 Gene3D SET domain 766 932 IPR046341 -
Lja1g0091 932 SUPERFAMILY FYVE/PHD zinc finger 319 384 IPR011011 -
Lja1g0091 932 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 555 671 IPR013083 -
Lja1g0091 932 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 932 IPR025780 -
Lja1g0091 932 MobiDBLite consensus disorder prediction 19 62 - -
Lja1g0091 932 Pfam SET domain 801 906 IPR001214 GO:0005515
Lja1g0091 932 CDD PHD_ATX3_4_5_like 505 551 IPR042011 -
Lja1g0091 932 ProSiteProfiles PWWP domain profile. 156 225 IPR000313 -
Lja1g0091 932 SMART set_7 790 913 IPR001214 GO:0005515
Lja1g0091 932 ProSitePatterns Zinc finger PHD-type signature. 506 551 IPR019786 -
Lja1g0091 932 PANTHER PHD FINGER PROTEINS 1 932 - -
Lja1g0091 932 SUPERFAMILY Tudor/PWWP/MBT 147 257 - -
Lja1g0091 932 SUPERFAMILY FYVE/PHD zinc finger 503 568 IPR011011 -
Lja1g0091 932 SMART PWWP_4 154 223 IPR000313 -
Lja1g0091 932 MobiDBLite consensus disorder prediction 19 44 - -
Lja1g0091 932 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 500 554 IPR013083 -
Lja1g0091 932 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 313 380 IPR013083 -
Lja1g0091 932 ProSiteProfiles Post-SET domain profile. 916 932 IPR003616 -
Lja1g0091 932 CDD SET_SETD1-like 779 928 - -
Lja1g0091 932 SMART PostSET_3 916 932 IPR003616 -
Lja1g0091 932 Gene3D - 148 257 - -
Lja1g0091 932 ProSiteProfiles Zinc finger PHD-type profile. 319 377 IPR019787 -
Lja1g0091 932 Pfam PHD-finger 518 552 - -
Lja1g0091 932 SMART PHD_3 616 670 IPR001965 -
Lja1g0091 932 SMART PHD_3 505 552 IPR001965 -
Lja1g0091 932 SMART PHD_3 321 375 IPR001965 -
Lja1g0091 932 ProSiteProfiles Extended PHD (ePHD) domain profile. 557 670 IPR034732 -
Lja1g0091 932 ProSiteProfiles Zinc finger PHD-type profile. 503 554 IPR019787 -
Lja1g0091 932 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 932 - -
Lja1g0091 932 Pfam PHD-zinc-finger like domain 559 669 - -
Lja1g0091 932 Pfam PWWP domain 157 253 IPR000313 -
Lja1g0091 932 SUPERFAMILY SET domain 786 929 IPR046341 -
Lja1g0091 932 ProSiteProfiles SET domain profile. 790 907 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0091 Lja-Chr1 752792 761076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0091 506 658 C2H2 Transcription Factor Family AT3G14740 33.951 3.64e-19 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lja1g0091 zf-HC5HC2H_2 1.4e-28 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0091 - - lja:Lj1g3v5034780.1 1957.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0091 1 752792 761076 Lja1g0091 1 752792 761076 ECH