Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0063 ATGGATCCTTTGACAACCTCTGTTTCTTCAACCCTCAAAATCTCACCATTTCCACCAACAAACCGTGAGTTCTATTACTTCACAAGAACTCCCTATGCACCACCCACCCGTCCTCCACAACACCATGTCTCCTCCGCTCCCACCGTTCACAACTTGATCCCCAAAATCAAAACTCTATCACACCACAAGTCTTCTTCTTCTCTAGCACCATCCTCCTCAAACACCCCACCTCCCAAAATCAAACCTTCACCTCCAATAATATTCCACCGAAACCCTGCCACTGGTTATGCAGCAGCTGTCATAGACGTGGCTCAGAGCACCAACTCCCTTCACTCTGTTCAAAGGGATGTTCAGAGGCTCTTGAAACTCCTCCAAACTGTGAACTTTGAATCATTTGTGGCTGACCCTTCAAGGATTGAGGAGGTTAGAAGACAAGCTTTGAAGAGGGTGTTGGAGAAGGGAAATTTCCACAGGCATGTGGTTACCATTTTGAAGATGCTGCTGAAGAAGAACAAGTTGGGGATTGTGCAACAAGTGTTGCAAGAGTTTGAAAGGATCTATGATGAGCTTTGTGGGACTCAAGTGGTGTTGGTTTCATCTGAGAAAAAAATGGGGGAAGATGAATTGTTGGGGATTGTTAAGAGCGTGCAGCAAATGAGTGGAGCAGTGAGGGTGAAGGTAAAAAATTTGGTTCCAGAGAGTTTGGCCTCTTTTGCTGTGTAA 723 0.4564 MDPLTTSVSSTLKISPFPPTNREFYYFTRTPYAPPTRPPQHHVSSAPTVHNLIPKIKTLSHHKSSSSLAPSSSNTPPPKIKPSPPIIFHRNPATGYAAAVIDVAQSTNSLHSVQRDVQRLLKLLQTVNFESFVADPSRIEEVRRQALKRVLEKGNFHRHVVTILKMLLKKNKLGIVQQVLQEFERIYDELCGTQVVLVSSEKKMGEDELLGIVKSVQQMSGAVRVKVKNLVPESLASFAV* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0063 240 Pfam ATP synthase delta (OSCP) subunit 94 235 IPR000711 GO:0015986|GO:0046933
Lja1g0063 240 PANTHER ATP SYNTHASE DELTA CHAIN 1 238 IPR000711 GO:0015986|GO:0046933
Lja1g0063 240 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 93 190 IPR026015 -
Lja1g0063 240 PANTHER ATPASE, F1 COMPLEX, OSCP/DELTA SUBUNIT PROTEIN 1 238 - -
Lja1g0063 240 MobiDBLite consensus disorder prediction 60 85 - -
Lja1g0063 240 Gene3D - 93 184 IPR026015 -
Lja1g0063 240 MobiDBLite consensus disorder prediction 60 74 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0063 92 240 Primary Pumps ATPases AT4G09650 30.000 3.39e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0063 K02113 - gmx:100526851 211.075