Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0057 ATGGCTACAAATTCCAAAACCTTTACTTTTGAGGAGGTGGCCAAACACAACAACAAAAAGGATTGTTGGATTATTATCAGTGGAAAGGTGTATGATGTCACACCATTTTTGGATGATCATCCTGGAGGTGATGAATCTTTAATATCGGCAACAGGGAAGGATGCAACCATTGACTTTGAAGATGTCGGCCACAGTGACTCTGCCGTAAAAATGATGAAGAAATACCTTGTTGGGGAAGTTGAAACCTCCACTTTACCATCCAAAGTCAACCACAGTCCACCACAACCTGCACAAGCACATGGTGTTAGCAATCAATCTTCAGGATTTGTTGTGAAGACATTGCAATTGCTGTTGCCATTGTTGATATTGGGCATTGCATTTGCTCTGCAGTACAAGAAGAAACAAGTCAGCGACTCATGA 420 0.4167 MATNSKTFTFEEVAKHNNKKDCWIIISGKVYDVTPFLDDHPGGDESLISATGKDATIDFEDVGHSDSAVKMMKKYLVGEVETSTLPSKVNHSPPQPAQAHGVSNQSSGFVVKTLQLLLPLLILGIAFALQYKKKQVSDS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0057 139 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Lja1g0057 139 Gene3D - 1 86 IPR036400 -
Lja1g0057 139 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Lja1g0057 139 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Lja1g0057 139 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Lja1g0057 139 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Lja1g0057 139 SMART Cyt_b5_2 8 81 IPR001199 -
Lja1g0057 139 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Lja1g0057 139 PANTHER CYTOCHROME B5 ISOFORM C 1 134 - -
Lja1g0057 139 PANTHER CYTOCHROME B5 1 134 - -
Lja1g0057 139 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Lja1g0057 139 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 87 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0057 Lja-Chr1 535423 537314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0057 1 135 NADPH P450 reductases AT5G53560 55.147 5.31e-55 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0057 K23490 - gmx:100788796 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0057 1 535423 537314 Lja3g1723 3 19284016 19287908 PCT