Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0034 ATGGCCAACCTTGTTAATTCGCGTGAGGAAGACAAGAAAAAAGCAGAGGAGTTAGAAGATGAAGAAAGCTTCTCTTATGCTATACACCTTGCCAACTCTGTTGTGTTTCCCCTAACATTACAAACCGCAAATGAACTTGGAGTATTTGATATCTTGCAAAAAGCAGGGCCAAATGCTAAGCTCTCTGCCAAACAGATAGCTTCCCAGCTTTCATGCACCAACCCAGAAGCGCCTTCAATGTTAGATCGCATCCTCTCCCTTCTTGCTTCTCACTCTGTCCTTAAATGCTCTGTTCTTCAAGATGAACAACAAAAAAACCTTCACAAACTCTACAATTCTGATGGTGTTTCCTTAGGCCCCTTGATGGCCTTACTTCAAGATAAGATCTTCGTAGCTAGCTCCCAACCTCTTCTGTCTGAGGCCCAACCTCCACGATCTCCACTAGTGCCGCCTTCCTCCACCAGTGCCGCCTTCCTCCACATCGAGCTCCACGATCTCCCAATCGCTGTTGCGGCCTTCGACGATGTCGACGTCTTCTGCAAACTCAACCTTCGAATCGAGCGTCTGCTTTACTGA 576 0.4705 MANLVNSREEDKKKAEELEDEESFSYAIHLANSVVFPLTLQTANELGVFDILQKAGPNAKLSAKQIASQLSCTNPEAPSMLDRILSLLASHSVLKCSVLQDEQQKNLHKLYNSDGVSLGPLMALLQDKIFVASSQPLLSEAQPPRSPLVPPSSTSAAFLHIELHDLPIAVAAFDDVDVFCKLNLRIERLLY* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0034 191 Gene3D - 5 118 IPR036388 -
Lja1g0034 191 SUPERFAMILY "Winged helix" DNA-binding domain 19 117 IPR036390 -
Lja1g0034 191 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 12 134 - -
Lja1g0034 191 Coils Coil 1 21 - -
Lja1g0034 191 PANTHER O-METHYLTRANSFERASE 12 134 IPR016461 GO:0008168
Lja1g0034 191 Pfam Dimerisation domain 39 89 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0034 Lja-Chr1 373688 376584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0034 14 137 Monolignol Biosynthesis Gene Families AT1G77520 39.437 3.72e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0034 K13066 - lja:Lj0g3v0306659.1 166.007