Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0021 ATGGCTGATGAACTGGATAAACCTTTGCTCGGTCCTGAGAATTTCAACCGAGAGGGCATTGATTTGGAGCGCATACCACTAGAAGAAGTATTTCAACAGTTGAGAACTTCACCAAGAGGACTTTCATATGAAGATGCTGAAGCCCGACTCGAGATATTTGGTCCAAACAAACTTGAAGAAAGGAAAGAAAATAAAATATTAAAATTTCTTAGTTTCATGTGGAATCCTCTGTCATGGGTTATGGAAGCAGCAGCATTGATGGCGATTATCCTTGCTAATGGTGGAGGGGGGGGTCCTGATTGGCAAGACTTTGTAGGGATTATATGCCTGCTGGTGATAAACTCAACTATTAGTTTTATTGAAGAAAATAATGCTGGTAATGCTGCAGCAGCGCTCATGGCTCATTTAGCTCCTAGAACAAAGGTTCTCAGAGATGGGCAGTGGCAAGATCAAGATGCAGCTGTTTTAGTACCTGGGGATATTATCAGCATAAAACTGGGAGATATCATTCCAGCTGATGCTCGCTTGCTCGAAGGAGACCCTCTAAAAATTGACCAGTCAGCCCTTACTGGAGAATCTCTACCCGTTACGAAGAAAACTGGTGATGAGGTATTTTCAGGTTCAACATGTAAACACGGAGAGATTGAAGCTGTAGTGATAGCAACAGGAGTTCACTCCTTTTTTGGAAAGGCTGCACACTTGGTTGACAGCACTCAAGTTGTTGGACATTTTCAGAAGGTCCTTACCTCAATTGGTAACTTCTGCATTTGCTCTATAGCTGCAGGGATGCTTCTTGAAATAATTATAATGTTCCCGGTGGAGCATAGATCATACAGGGATGGAATCAACAACCTTCTTGTTCTCCTGATTGGAGGAATACCCATAGCTATGCCAACAGTATTATCTGTAACACTTGCCATTGGCTCTCATCGCCTTTCTCAGCAGGGAGTTATCACAAAAAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCTTATGCAGTGACAAAACTGGAACTCTTACGCTAAATCGCCTGTCTGTTGATCGAAACCTTATCGAGGTCTTTAACAGCAATATGGACAAAGATCTGGTTGTTCTACTAGCAGCCAGGGCAGCTAGACTGGATAACCAGGATGCCATTGATGCTGCCATTGTTAATTTGCTAGCTGATCCAAAGGAGGCACGTGCAAACATTACTGAAGTCCATTTTCTACCATTCAATCCTGTGGATAAACGTACAGCCATAACATACATTGACGCTGATGGAAATTATTATAGGGCCAGTAAAGGAGCTCCAGAACAGATTTTAAATATGTGCCAAGAGAAAGACAAGATTGCCAGAAGAGTGCACACAATCATAGACAAATTTGCTGAAAGGGGATTGCGTTCTCTTGCAGTTTCTTATCAGGAAGTCCCTGAAAAATCCAAGGATAGCCCTGGAGGTCCTTGGACATTTTGTGGCTTGTTGCCTTTGTTTGATCCACCAAGACATGATAGTGCTGAGACCATCCGAAGAGCACTTAACCTTGGAGTCAATGTTAAGATGATTACAGGGGATCAGTTGGCTATTGCAAAGGAGACAGGGCGAAGACTTGGTATGGGGACAAACATGTACCCTTCACCATCTTTGTTGGGCCGTGAAAAAGATGAGAATCATGAAGCTCTCCCAGTTGACGAGCTCATTGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAACATAAATATGAAATAGTGAAAATTTTACAAGAAATGAAACATGTTGTTGGAATGACCGGAGATGGAGTAAATGATGCCCCAGCATTGAAGAAAGCAGATATTGGAATAGCTGTGTCAGATTCTACAGATGCTGCAAGAGGTGCTGCTGATCTGGTCTTAACTGAGCCTGGTTTAAGTGTGATTATTAGCGCTGTGTTAACTAGCCGAGCTATATTTCAAAGAATGAAAAATTATACAATATATGCAGTCTCAATCACCATAAGGATAGTGCTCGGTTTTGTGCTCCTAGCGTTGATTTGGGAGTATGATTTTCCACCCTTCATGGTCCTGATCATTGCAATCCTAAATGATGGTACTATAATGACCATATCTCAAGACAGGGTAAAGCCATCCCCCACACCTGACAGTTGGAAGCTGCCTGAGATATTTGCAACAGGAGTAGTGATTGGCACTTACCTTGCCTTGGTTACTGTCCTGTTCTACTGGATAATCATTGAAACCACTTTCTTTGAGACCTACTTCCATGTAACCTCCTTATCCAGCGACGGCGAGAAAGTTTCATCGGCCGTGTATCTGCAAGTTAGCATCATTAGCCAGGCTCTAATTTTTGTCACTCGTAGCCGTGGTTGGTCATTTCTAGAGAGACCTGGAGTTCTACTGATGTGCGCCTTTGTAGTAGCTCAACTGGTGGCCACCTTAATTGCAGTGTATGCATATATCAGTTTTTCTGAAATTAGAGGAATTGGATGGGGATGGGCTGGTGTTATATGGTTATACAGTTTAATCTTCTATGTACCCTTGGACATCATTAAGTTCACAGTGCGCTATGCCTTGAGTGGAGATGCCTGGAATCTCCTATTTGACAGAAAGACTGTTTTTACATCTAAGAAAGACTACGGGACGGAAGATAGGGCTGCAAAGTGGGTTCTTTCTCAGAGTAGTCTGCAAGGTCTTAATCTCGAGGGCCCTGGAAGGCGTTCTTCTTTGATAGCCGAACAGGCCAGGAGACGTGCTGAAATAGCCAGGCTGGGGGAGTTACACACTCTCAGAGGACATGTGGAGTCTGTTTTGAGACTCAAAAATTTAGACCTCAGTGTGCTACAATCAGCTCATACAGTCTAA 2847 0.431 MADELDKPLLGPENFNREGIDLERIPLEEVFQQLRTSPRGLSYEDAEARLEIFGPNKLEERKENKILKFLSFMWNPLSWVMEAAALMAIILANGGGGGPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAHLAPRTKVLRDGQWQDQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTQVVGHFQKVLTSIGNFCICSIAAGMLLEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGVITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDRNLIEVFNSNMDKDLVVLLAARAARLDNQDAIDAAIVNLLADPKEARANITEVHFLPFNPVDKRTAITYIDADGNYYRASKGAPEQILNMCQEKDKIARRVHTIIDKFAERGLRSLAVSYQEVPEKSKDSPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSPSLLGREKDENHEALPVDELIEKADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVSDSTDAARGAADLVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISQDRVKPSPTPDSWKLPEIFATGVVIGTYLALVTVLFYWIIIETTFFETYFHVTSLSSDGEKVSSAVYLQVSIISQALIFVTRSRGWSFLERPGVLLMCAFVVAQLVATLIAVYAYISFSEIRGIGWGWAGVIWLYSLIFYVPLDIIKFTVRYALSGDAWNLLFDRKTVFTSKKDYGTEDRAAKWVLSQSSLQGLNLEGPGRRSSLIAEQARRRAEIARLGELHTLRGHVESVLRLKNLDLSVLQSAHTV* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0021 948 ProSitePatterns E1-E2 ATPases phosphorylation site. 337 343 IPR018303 -
Lja1g0021 948 Gene3D - 100 821 - -
Lja1g0021 948 Pfam Cation transporter/ATPase, N-terminus 25 87 IPR004014 -
Lja1g0021 948 PANTHER CALCIUM-TRANSPORTING ATPASE 1 928 - -
Lja1g0021 948 PRINTS H+-transporting ATPase (proton pump) signature 625 650 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja1g0021 948 PRINTS H+-transporting ATPase (proton pump) signature 566 582 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja1g0021 948 PRINTS H+-transporting ATPase (proton pump) signature 594 610 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja1g0021 948 PRINTS H+-transporting ATPase (proton pump) signature 451 469 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja1g0021 948 PRINTS H+-transporting ATPase (proton pump) signature 766 787 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja1g0021 948 Pfam E1-E2 ATPase 136 314 - -
Lja1g0021 948 Gene3D - 332 631 IPR023214 -
Lja1g0021 948 Gene3D - 347 494 IPR023299 GO:0000166
Lja1g0021 948 SFLD p-type atpase 317 645 IPR044492 -
Lja1g0021 948 Gene3D - 138 222 - -
Lja1g0021 948 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 928 - -
Lja1g0021 948 SUPERFAMILY HAD-like 331 641 IPR036412 -
Lja1g0021 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 569 679 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja1g0021 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 355 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja1g0021 948 PRINTS P-type cation-transporting ATPase superfamily signature 489 500 - -
Lja1g0021 948 PRINTS P-type cation-transporting ATPase superfamily signature 617 629 - -
Lja1g0021 948 PRINTS P-type cation-transporting ATPase superfamily signature 594 613 - -
Lja1g0021 948 PRINTS P-type cation-transporting ATPase superfamily signature 185 199 - -
Lja1g0021 948 PRINTS P-type cation-transporting ATPase superfamily signature 511 521 - -
Lja1g0021 948 PRINTS P-type cation-transporting ATPase superfamily signature 335 349 - -
Lja1g0021 948 SFLD Haloacid Dehalogenase 317 645 - -
Lja1g0021 948 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 853 IPR023298 -
Lja1g0021 948 CDD P-type_ATPase_H 40 847 IPR006534 GO:0008553|GO:0016021|GO:0120029
Lja1g0021 948 Pfam haloacid dehalogenase-like hydrolase 331 608 - -
Lja1g0021 948 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 40 812 IPR006534 GO:0008553|GO:0016021|GO:0120029
Lja1g0021 948 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Lja1g0021 948 Gene3D - 900 948 - -
Lja1g0021 948 SUPERFAMILY Calcium ATPase, transduction domain A 138 235 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0021 Lja-Chr1 237774 247000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0021 1 948 Primary Pumps ATPases AT1G17260 79.325 0.0 1522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0021 K01535 - zju:107434382 1654.8