Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja1g0007 | ATGAGCATGAGTGACTCGTCGTCGTCCGTTGCAAGTGATAAACTGGGTGAGTCCCCAGCCGTTGAGTTTACAGGGAAGATTATGATGGGGGCTATAATAGTTTTATTCATGGTTGTCGTGTGTTTTCTGTTCAAGCATCTCTATGACAAAGGCTTCTGGTGGCGCCCTGGAGGAGACATCACCACTGCTCCTCAATCCGAACCCCGCCGCCCTAGAACTGGCCTTGATCCTTCTGTCCTCAGGTCTCTACCTGTAGTGGTATTCCAATCCCAAGACTTCAAGGATGGTTTAGAATGTGCAGTTTGCCTCTCCGAGCTTGATGAAGGAGAAAAGGCCAGGCTTTTACCTAAATGCAATCATGGCTTTCACGTTGATTGCATTGATATGTGGTTCCAATCCCATTCTACTTGCCCTCTTTGCAGGACTTCAGTAGCCTCTCATGACTCTGACAACAACCTCCAATCATCATCATCAGATTCTTCCTCAACTTTCCCCACAAATGTGTTGATTTGGGGCAACGACACCCAAATAAGTAGTACTACTACACCAACTTCTTCTTTGGAAGGAAGCACTTCTCAGCCTCCTCAGGCTCAGCTACCTTGCTCCTCATCCTCCTCTTCCCATACAAGCTGTAACTGTAGTAATGGAAATGGAGAGTTAGTGATTGATATACCAAGTCAGATCACTTCATCCTCTTTATCACCTTCTGCAAGCACCTTTGCGGAAGATGAGCTGAAATCGCCCATTATAGGGAGGTTGAGATCGTTGAAGAGACTATTAAGCTGGGACACAAGGCTAAATCCTTTGACCCCGCGTTCTGCTTCTTCAGATGTCGAACAAGCAGGGGGAAGACAGAGCTAG | 861 | 0.4692 | MSMSDSSSSVASDKLGESPAVEFTGKIMMGAIIVLFMVVVCFLFKHLYDKGFWWRPGGDITTAPQSEPRRPRTGLDPSVLRSLPVVVFQSQDFKDGLECAVCLSELDEGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRTSVASHDSDNNLQSSSSDSSSTFPTNVLIWGNDTQISSTTTPTSSLEGSTSQPPQAQLPCSSSSSSHTSCNCSNGNGELVIDIPSQITSSSLSPSASTFAEDELKSPIIGRLRSLKRLLSWDTRLNPLTPRSASSDVEQAGGRQS* | 287 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja1g0007 | 286 | MobiDBLite | consensus disorder prediction | 179 | 203 | - | - | |
Lja1g0007 | 286 | SUPERFAMILY | RING/U-box | 79 | 147 | - | - | |
Lja1g0007 | 286 | ProSiteProfiles | Zinc finger RING-type profile. | 99 | 141 | IPR001841 | - | |
Lja1g0007 | 286 | PANTHER | RING-H2 FINGER PROTEIN ATL3 | 9 | 280 | - | - | |
Lja1g0007 | 286 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 9 | 280 | IPR044675 | - | |
Lja1g0007 | 286 | SMART | ring_2 | 99 | 140 | IPR001841 | - | |
Lja1g0007 | 286 | CDD | RING-H2_EL5_like | 98 | 141 | - | - | |
Lja1g0007 | 286 | Pfam | Ring finger domain | 98 | 141 | IPR001841 | - | |
Lja1g0007 | 286 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 63 | 147 | IPR013083 | - | |
Lja1g0007 | 286 | MobiDBLite | consensus disorder prediction | 267 | 286 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja1g0007 | Lja-Chr1 | 72590 | 74013 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja1g0007 | 22 | 261 | C3H Transcription Factor Family | AT1G53820 | 37.838 | 3.46e-51 | 169 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja1g0007 | - | - | lja:Lj1g3v5062680.1 | 520.005 |