Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1404 ATGGCGGGTTTATTCTCACTAGGCGGTGGAGGTAGAGGAACGAGCCAGCAGCAAGAAGAAGAAGAAACACGAGGGCATCATAACCTAACCACGGAATTCCCTCCGCCCGAGACCCTATTCTGCCCTGATGGGTTGATTGACAGGGAAGGAACTGTTTCTCCTCTTTTCTTCGATCATTCTCTCTCCCTCACAGTCTCACTCCCTACCACTTTCTCATTCCCTTTGAAATCTGATTTTCCTGCAGTACTAAGCTCGCCTGTGGATTTCCGATGCGTGCGGGTGAACTCCATTGACGACGCGGACGAACAATTTGCATACCAGACGGCGGTGAACATTGGAGGGCATGTGTTCAAAGGAATTCTGTACGACCAAGGTCCTGAATATAATTACACAGCAGCTGGAGATGTGAGCGCCCACGCCGGCGTAGGCGGAGTTCAACCATTAAACCTCATGGCCGGTGCCCCCAGCGGCGCGTCTGTTTTGGGCGCGAGCTCAATAAGTGTCGGTGCCATGGTTTCTCCAAGTGGGGCACTTGGGGATCCTTCTTTGTATCCAGCTCCATTTGACCCCTTCATGGCTGGAGGCAGTGGATCTGCTGATAACTTGCTAGCATAA 615 0.522 MAGLFSLGGGGRGTSQQQEEEETRGHHNLTTEFPPPETLFCPDGLIDREGTVSPLFFDHSLSLTVSLPTTFSFPLKSDFPAVLSSPVDFRCVRVNSIDDADEQFAYQTAVNIGGHVFKGILYDQGPEYNYTAAGDVSAHAGVGGVQPLNLMAGAPSGASVLGASSISVGAMVSPSGALGDPSLYPAPFDPFMAGGSGSADNLLA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1404 204 MobiDBLite consensus disorder prediction 1 35 - -
Lele56g1404 204 Pfam Domain of unknown function (DUF702) 74 127 - -
Lele56g1404 204 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 79 126 IPR006511 -
Lele56g1404 204 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 64 188 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1404 Lele-ChrLele56 17103577 17105921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1404 77 196 C2H2 Transcription Factor Family AT1G19790 46.875 3.63e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele56g1404 DUF702 4.4e-22 No_clan