Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1402 ATGTCCAGGGTTTGGAAGCAGAAAATTGCCCTAGTTCAAGCTATGCCACTCGCTGATCATCAAAATGATAGAATTGGACTATATGCAGCCTTCATATGGCTGAAAAGGGTCGAGGAGGAAGCTTCTTGCTTCCATTCTGGAAGCTCCCTGTGTTCACATCAGATCAATCTCCCCCGTTTTCGAAACAGCCCTCCACGGCCTGCGGTAGTCTCTGGAGGAGCAGCGGCCGAGATGTCTGAGGTTGCTGTATCAATAGTTGTTGAAAAGCTTTCAGAACTTCTATTCGAACAAGCCGTGAACGCAGTTTCTTCACTAGATGGTGTGCGCAACGACGTAGAGAGGCTGAAGAATGAGTTACGATGGATGCAAGGCTTTCTAAGGGATGCCGATGCTAAACAAGAAGAAAACCAACTGGTTCGCATGTTAGTTTCCGATATTAGAGATATTGCTTTTGAAGCCGAGGAGCTAATAGAGATTTATGTTTACAAGGTAGCGTGTCACAGCAGATGGGACAGAGTCTTTAGATCCTTACATCTCTACGAGGTCTCCAGAAAAATCGAGAAAATTAGACAGAGGATACATGATGTATCTAAAAAACGAGAAACCTACGGCGTTGTCAGTGAAATACGGGGGCAAAATATTACCAAAGAAAGGTTGAGGCACTGGAGACAGCCGTGGCCCTACACTGAAGAGGAGTGTGTAATTGAGCTTGAAGATGACATGGAATTCCTGCTCGATCAACTGCTTACAGTGGACGCTGGGCGGGTGGTTTCTATAGTTGGAATGGGGGGTTTGGGTAAAACCACCTTAGCTAAGAAATTGTATAATCACAGCAGAATTCATAACCATTTTGATTGTAGAGCTTGGGTTTATGTGTCCAAAGAGTACAGAAGAAGAGACATTCTGCTAGGAATTCTCAAGGACGCAGATGCTCTCAATCGAAATGAAATTGACAGATTGGAGAGATTGCGGGAGGAAGACATGGTGAACCGGCTGCATTCTATCTTGGACGAGAAAAGGTATTTGGTAATTCTTGATGATATTTGGAGCATGGAAGTTTGGGATAGCCTAGAATCTGCATTTCCCAGAGGGAAGATGGGTAGTAAAATTCTTCTCACAACCAGAGACATGAAAATAGGTAAGCATGCTGGCGGTGGGGGCAACACTCATAAACTACGAACACTGACTGAAGACGAGAGTTTGAGATTACTGTGCTACAAAGCATTCCCTGGAATGAATAGCATTCCCCCGGAGTTGGGGAATCTTGCAAGTGATGTTGTAGTGAAATGTGGTGGTTTGCCTCTGGCTGTGGTGGTGGTTGGTGGTTTATTATCTAGAAAGCTTGAGTCAAACGAGGAATGGTTGCGGGTAGCTGAAAATATCAGTTGGCATCTGCTGAATGAGCAAGACAGAATACGAGGTATTTTGGCCTTGAGCTACAATGACTTGCCTTCTCACTTGAAATCATGCTTTCTCTATCTAGGCCTTTTCCCAGTTGGCATGAGCATTCAGACCAAAAAGTTGATTCGCCTGTGGGTCGCAGAAGGTTTTTTACCACAAGAAGGTGCAGAAACAGCGGAAGGTGTTGCTGAGAACTGCTTAAATGAGTTGATTGGTAGGTGCATGGTTCAAGTGGGCTCAGTAAGTTCCTTAGGCAAAGTCAAAACAATTCGCATCCATGATCTTCTCAGGGATATTTCCGTCTCCAAAGGGCAAGAGGAATATTTTCTTCGCATATATCTTGGCAGCCTGGAGAGTTCATCAGCATCTCAGGTAAATAGATCCCGCCGGCATGCCATACATTCTTGCTATGACCGTTATGACTTCTTGAAACACAATGCTCATCATTCACGTTCCCTCCTCTTCTTCAATAGAGAATATAATGCAGATATAGGGAAGAGAATACGGTTCTATGACCAGCAGTACAATATGAATTTCCTGCTAGAAAAGAAACTGAATTTAATTTTTAGCAAATTCAAGCTTCTCAGGGTTTTAGAGTTAGATGGTGTTCGGGTTGTTCGTCTGCCGAACACAATAGGGGACCTTATTCAATTAAGGTATCTTGGATTGAGGAAGACTAATTTGGAAGAGGAACTTCCACCTTCCATTGGTAACTTGCTGAACCTGCAGACGCTTGATTTAAGGTACTGCTGTTTTCTTAAGAGGATACCAAATGTGATTTGGAAGATGATTAGTTTGAGGCATTTGCTTCTGTATACTCCATTTGATTCTCCAGATAGCTGTCATCTAAGAATGGACACATTAACCAATTTACAAAGCCTGCCATACATAGAAGCTGGAAACTGGATAGAAGATGGGGGTCTAGAAAAAATGAGAAGTCTCAGGCAATTGGGAATATATGAATTACCTGGAAAATTGGTGAGGTCAGTGCTTTCTATTGCACAAGGATTAGTTCACCTTCACTTGCTGTCTCTATCACTTCAATCCGAAGAAGATGAATTTCCAATCTTGATGCAGCTTTCTCAGTGCACTCATCTCCACAAGCTCTCTTTGAATGGGAGGATCAAGAAGCTACCTGACCCTCATGAATTCCCGCCAAACCTTATGAAACTAACTTTACATAACGCCCATTTACAGATGGAATCCATTGCCAAACTTGAGAGGTTGCCAAAACTGAGAATGCTTGTTTTAGGGAAAGGGGCATACGACAGGCGGGAATTGATCTTCTGTGCGGATGGATTTCCAAAATTGCAAATTCTAAGGCTTAATGTTTTGAAAGAATTGGAGGAGTGGACCGTTGAGGAAAGGGCAATACCGAGACTCGAGCACATCATTATTAATCGCTGTGAGAAGTTGAAGAAGATCCCAGAAGGACTGAAGGCTCTTTCTTCCCTCAAGGAAATAAAAATTATAGGAATGCCTGTAGAATTTGAACAGAGACTACGAACTAAAGACTTGCTGGAATTCCAAAATACCCCTTCAATTGAATCAACTACAGACATTTTGGCTAATGGTAAGCTAAATATTCATCACTGA 2997 0.4284 MSRVWKQKIALVQAMPLADHQNDRIGLYAAFIWLKRVEEEASCFHSGSSLCSHQINLPRFRNSPPRPAVVSGGAAAEMSEVAVSIVVEKLSELLFEQAVNAVSSLDGVRNDVERLKNELRWMQGFLRDADAKQEENQLVRMLVSDIRDIAFEAEELIEIYVYKVACHSRWDRVFRSLHLYEVSRKIEKIRQRIHDVSKKRETYGVVSEIRGQNITKERLRHWRQPWPYTEEECVIELEDDMEFLLDQLLTVDAGRVVSIVGMGGLGKTTLAKKLYNHSRIHNHFDCRAWVYVSKEYRRRDILLGILKDADALNRNEIDRLERLREEDMVNRLHSILDEKRYLVILDDIWSMEVWDSLESAFPRGKMGSKILLTTRDMKIGKHAGGGGNTHKLRTLTEDESLRLLCYKAFPGMNSIPPELGNLASDVVVKCGGLPLAVVVVGGLLSRKLESNEEWLRVAENISWHLLNEQDRIRGILALSYNDLPSHLKSCFLYLGLFPVGMSIQTKKLIRLWVAEGFLPQEGAETAEGVAENCLNELIGRCMVQVGSVSSLGKVKTIRIHDLLRDISVSKGQEEYFLRIYLGSLESSSASQVNRSRRHAIHSCYDRYDFLKHNAHHSRSLLFFNREYNADIGKRIRFYDQQYNMNFLLEKKLNLIFSKFKLLRVLELDGVRVVRLPNTIGDLIQLRYLGLRKTNLEEELPPSIGNLLNLQTLDLRYCCFLKRIPNVIWKMISLRHLLLYTPFDSPDSCHLRMDTLTNLQSLPYIEAGNWIEDGGLEKMRSLRQLGIYELPGKLVRSVLSIAQGLVHLHLLSLSLQSEEDEFPILMQLSQCTHLHKLSLNGRIKKLPDPHEFPPNLMKLTLHNAHLQMESIAKLERLPKLRMLVLGKGAYDRRELIFCADGFPKLQILRLNVLKELEEWTVEERAIPRLEHIIINRCEKLKKIPEGLKALSSLKEIKIIGMPVEFEQRLRTKDLLEFQNTPSIESTTDILANGKLNIHH 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1402 998 Pfam NB-ARC domain 238 481 IPR002182 GO:0043531
Lele56g1402 998 Pfam Rx N-terminal domain 82 169 IPR041118 -
Lele56g1402 998 Gene3D - 394 479 IPR042197 -
Lele56g1402 998 Coils Coil 98 118 - -
Lele56g1402 998 Gene3D - 480 570 IPR036388 -
Lele56g1402 998 Gene3D Ribonuclease Inhibitor 634 987 IPR032675 -
Lele56g1402 998 PRINTS Disease resistance protein signature 256 271 - -
Lele56g1402 998 PRINTS Disease resistance protein signature 335 349 - -
Lele56g1402 998 PRINTS Disease resistance protein signature 430 444 - -
Lele56g1402 998 PRINTS Disease resistance protein signature 704 720 - -
Lele56g1402 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 494 IPR027417 -
Lele56g1402 998 Gene3D - 217 384 IPR027417 -
Lele56g1402 998 Gene3D - 81 201 - -
Lele56g1402 998 PANTHER DISEASE RESISTANCE PROTEIN RP 102 937 IPR044974 GO:0006952
Lele56g1402 998 Coils Coil 306 326 - -
Lele56g1402 998 FunFam Probable disease resistance protein At1g63360 480 569 - -
Lele56g1402 998 FunFam Probable disease resistance protein At1g61300 218 386 - -
Lele56g1402 998 SUPERFAMILY L domain-like 559 979 - -
Lele56g1402 998 CDD RX-CC_like 79 198 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1402 Lele-ChrLele56 17081791 17085989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1402 255 566 WRKY Transcription Factor Family AT5G45050 23.438 6.03e-08 55.1