Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1387 ATGGTACATCACAGGATGCAATCCGTAGGGTTTGGAGAAGAAATCAAATCTTCTTCTTCGAGAGTTAAACACCATAGGGTTAAAAATTATGGCAATCTAAGTGGTAAAGTAAGGCAGGATCAAACATGGGAAGATAAGCATATGACTGCTTCAATAGGAAGAATCAACGAAATGGTTGCAGAGGCAACACTTTCTAAGAATCCCCAAGGGCATACTTCATTAACAGGCTCCACAGGGGCCATTAAATCATCTGCTCCTGTTTTCTTTTCAAATCCAACCGACAAGAGGATCCGAAGCAGATCATCATCATCGTTCAGTTCTAGTATTGGAATATCTGCACTGTCCAGCTCCTCTGCGACGAGCAGGGAGGATACTGGGAAGAGCGATTCTGGAGGGAAAAAACCCGAGAAGAAGAAGAAGAACAAGAACAAGAAGGAGAAAGGAGCATTGTTTGCATGTATGGGACAAGAGTCATGCATGAACGTCTCAAGAAGATCGCCGGAAGGTGCAAGAGTTGATGAAGCATTGATCATCGAGAGAGCGTGCGTGGTGGAGAGTCTGCCACAATTCTGGGCAGATAAGTATCAACCAGCTTCACTCAGTGCCTTCGTTTGCCACAAACAAGAAGCTCAACTTCTCAAGGAATTAGTGTGTCTTGATGAATTTCCACACATTTTGCTGAAAGGTCCCTCTGGTTCTGGGAAAAGAGCATTAGCAATGGCTCTTCTGCGAGAATTATTCGGCGAAGAGTGTTGGAACAACGAAGGAAGGCCTATGAAAGTAAGTGTTCCCATAACGTTCAGTTGTCATCACGTGGAACTAAACGTAAATTTGGAACGCAATGCTAAGTATGCCTTGATTGGATTAGTGAAGGAAATGAGCCGTATCTATGAAATAACACCCCAAGATCCCAATCTTAATATCAAGTCAGATTGTCAAGTGATGGTTCTCTATGAGGTTGACAAAGCGGAAGAGGATATTCAGCAGATAATCCAGTGGATTATAGACTGCCACTCCAAAATATGCAAACTAATACTCTGCTGCCAAGACGATGTTGACATTCCTGAGTCTGTGAGGAACCAGCTCAAAGTTATTGAAGTTCATTCCCCTACTACTCTTCAGATTATGGAGGTTCTGTTTGAGATAGCAAAGGAGGAGGATATTCATCTATCAAAGAATTTTGCTGCTATGATTGCTGCAAAATCTAATCAGAATCTCAGGCAAGCTATCATGGCTCTTGAGGCATGCAAAGCATTCAAATATCCATTTTTGGAAGAACAACCAATTTCAATTGGATGGGAGGACGTTGTCATAGAAATTGCTTCAGAGATTATAGCTGATCCATCAAATTCATGGACAAAAGACTCCCACCTGGAACTATAG 1383 0.423 MVHHRMQSVGFGEEIKSSSSRVKHHRVKNYGNLSGKVRQDQTWEDKHMTASIGRINEMVAEATLSKNPQGHTSLTGSTGAIKSSAPVFFSNPTDKRIRSRSSSSFSSSIGISALSSSSATSREDTGKSDSGGKKPEKKKKNKNKKEKGALFACMGQESCMNVSRRSPEGARVDEALIIERACVVESLPQFWADKYQPASLSAFVCHKQEAQLLKELVCLDEFPHILLKGPSGSGKRALAMALLRELFGEECWNNEGRPMKVSVPITFSCHHVELNVNLERNAKYALIGLVKEMSRIYEITPQDPNLNIKSDCQVMVLYEVDKAEEDIQQIIQWIIDCHSKICKLILCCQDDVDIPESVRNQLKVIEVHSPTTLQIMEVLFEIAKEEDIHLSKNFAAMIAAKSNQNLRQAIMALEACKAFKYPFLEEQPISIGWEDVVIEIASEIIADPSNSWTKDSHLEL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1387 460 CDD AAA 208 247 - -
Lele56g1387 460 Gene3D - 373 423 - -
Lele56g1387 460 MobiDBLite consensus disorder prediction 65 147 - -
Lele56g1387 460 MobiDBLite consensus disorder prediction 65 125 - -
Lele56g1387 460 Gene3D - 189 370 IPR027417 -
Lele56g1387 460 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 188 451 - -
Lele56g1387 460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 418 IPR027417 -
Lele56g1387 460 FunFam replication factor C subunit 3 371 429 - -
Lele56g1387 460 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1387 Lele-ChrLele56 16970990 16974796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1387 190 449 Core DNA Replication Machinery Family AT5G27740 34.799 7.36e-47 164