Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1370 ATGTCTTCCTCATCCCCTGAAACTGCTCCATCTTCAGATTCTGGTAATGATGGTGATGACTTCACCGGAGGTTCATTATCACAAAGCCCTCCATCACCATCACCACCACCACCAGCCCAACATAATCCTACTACCGATCTAGTTGTGTTTTCGATGCCGCCGCCTCCGCCGCCGCCTGGCTCTTCTGGTTCCAATAATAATTCCTATTCTGGTTCACCGAACAACCAAGGCCCTCCTGGTGACCAATCGCAATCTCCGCCTTCTTCAAGTCCTTCATCACCGAACAAATCGTCGAATCCTGGTTCATCCTCAACACCAAAATCTTCCCACGGGAACAAGCATTCGCCTCCTCCACTATCTGATTCCAGTGAAAATAGCAGCAATAACGACAGTAGAGCAATTATCGGAGCCGCCGTTGGTGTAGGGTTCGTTCTTCTTATTATGATCGTCGTCTGTATCATTTGCTGCAGAAAGAAGAAGCGAAAGCAAAGGTATTACTATAGCGACGATGGCAAACCCGGCAAGGCTGCAAGTGGTTATTACAACAGAGGACAGCACCCAAATAACTGGCACCATGGTGGGAATGACCATGTTGTGAGGATGCAGCAATCACCGGGCATGGGCATGGGTATGGGTCCGGACAGTGGTGGGTGGGGCCCAGTTCCACCACCTCCTCCGCCACACAGCACAGATATGAGTTCCAATTATTCGTTGGGGCCACCAATGCCTCCGCCTTCGCCAGGGATGACTTTAGGGCTGAACTGCGGGACCTTCGCTTTTGAAGACTTGGCTGCGGCAACGGAGGGCTTTGCCGATAAGAATCTGATAGGACAAGGAGGTTTTGGTTACGTGCATAAGGGTGTTTTGCCTAATGGAAAGGAAGTTGCAGTGAAGAGCTTGAAAGCTGGTAGTGGCCAAGGAGAGCGTGAGTTCCAAGCTGAGATTGAAATCATTAGTCGTGTTCATCATCGCCATCTTGTGTCGCTTAATGGCTACTGTATTGCTGGTGGTCAACGAATGTTGGTTTATGAATTTGTTCCCAACAACACTCTTGAGCATCACCTTCATGTAGGATCTGCCAAAGGGCTTGCATACCTTCATGAAGACTGTGAGTTCTCTGATCATATGTACTTGGCTCCAGAATATGCGTCAAGTGGAAAATTGACTGAGAAGTCAGACGTGTTCTCTTTCGGAGTGATGTTGTTAGAAATTATAACAGGGAAGAGACCTATAGATATCCAAAATATGGTGGACGATAGTTTAGTAGACTGGGCTCGACCACTCTTGGCAAGAGGGCTTGATGATGGCAACTTTGAAGAACTGGTGGATCCGTTCTTGGAAGGCAATTACAATAACCAGGAATTGTCTAGCATGGCGGCCTGCGCTTCTGCCAGCATTCGTCATTCCGGCAAAAAACGTCCTAAAATGAGCCAGATCGTAAGAGCGCTGGAAGGGGATGTGTCACTGGACGACTTAAACGATAAGGCAGGGCATCATGGGCACCTTCTGGCATCTTCATCGAGCTCAGAGTACAATTCAAGTGCGTATCAGGCCGATATGAAGAGGTTCAGACAGTTAGCTCTGGCGAGTCAGGAATTCGGAAGCAGTGAATCAAGTGGTGAAATTTCTCAGGCTAGCCAGAAGCAACATCTTTAG 1656 0.4849 MSSSSPETAPSSDSGNDGDDFTGGSLSQSPPSPSPPPPAQHNPTTDLVVFSMPPPPPPPGSSGSNNNSYSGSPNNQGPPGDQSQSPPSSSPSSPNKSSNPGSSSTPKSSHGNKHSPPPLSDSSENSSNNDSRAIIGAAVGVGFVLLIMIVVCIICCRKKKRKQRYYYSDDGKPGKAASGYYNRGQHPNNWHHGGNDHVVRMQQSPGMGMGMGPDSGGWGPVPPPPPPHSTDMSSNYSLGPPMPPPSPGMTLGLNCGTFAFEDLAAATEGFADKNLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIEIISRVHHRHLVSLNGYCIAGGQRMLVYEFVPNNTLEHHLHVGSAKGLAYLHEDCEFSDHMYLAPEYASSGKLTEKSDVFSFGVMLLEIITGKRPIDIQNMVDDSLVDWARPLLARGLDDGNFEELVDPFLEGNYNNQELSSMAACASASIRHSGKKRPKMSQIVRALEGDVSLDDLNDKAGHHGHLLASSSSSEYNSSAYQADMKRFRQLALASQEFGSSESSGEISQASQKQHL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1370 551 SUPERFAMILY Protein kinase-like (PK-like) 244 483 IPR011009 -
Lele56g1370 551 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 140 371 - -
Lele56g1370 551 MobiDBLite consensus disorder prediction 1 128 - -
Lele56g1370 551 ProSiteProfiles Protein kinase domain profile. 270 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1370 551 MobiDBLite consensus disorder prediction 532 551 - -
Lele56g1370 551 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Lele56g1370 551 MobiDBLite consensus disorder prediction 1 28 - -
Lele56g1370 551 MobiDBLite consensus disorder prediction 63 128 - -
Lele56g1370 551 Pfam Protein tyrosine and serine/threonine kinase 274 358 IPR001245 GO:0004672|GO:0006468
Lele56g1370 551 Pfam Protein tyrosine and serine/threonine kinase 374 480 IPR001245 GO:0004672|GO:0006468
Lele56g1370 551 Gene3D Phosphorylase Kinase; domain 1 249 345 - -
Lele56g1370 551 FunFam proline-rich receptor-like protein kinase PERK1 248 345 - -
Lele56g1370 551 Gene3D Transferase(Phosphotransferase) domain 1 372 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1370 Lele-ChrLele56 16844451 16849227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1370 132 543 Trihelix Transcription Factor Family AT1G70460 40.671 4.09e-98 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele56g1370 PK_Tyr_Ser-Thr 2.9e-08 CL0016