Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1364 ATGATCCTCACTAGCTGTAGCAATACGCTAGATTTCCCTGGTGCTGTTTCCCTTGGTGATAGAACTGGTAAAGGTTGCCTAAGACCTCATTTGAACCTGAAAAGAAAAGATTCATTAAATAATGCTCTTAATATTAGGTATTTGACTCTTGATGGTATTTCAAGTTTTCCTCATCGACCATGGCTGAAGAATTTCTCTAGTACATATTGTACTTCCTACTTTGCTCGGGCAGCACACAATGTCTCATTTGACAGCAGCGTTTGTGATGAACAGCTTGAAAATTCCTCCCCTACAGTAGAACCAACAATTGATGGCAGCGAGACTTTGAGGCTATTTTCAGGATCTAGTTACCTACCACATCAGGAGACAGGTGGAGAAGATGCTCATTTTATTTGCCCTGACGAACAAGCATTTGGTGTTGCAGATGGTGTAGGTGGTTGGGCTGAAGTTGGTGTCAATGCGGGACTGTTTTCTCGTGAACTGATGTCCAATTCCGTAAGAGCAATCCAAGACGAACCAAAGGGTTGTATTAATCCAGCGAGGGTGTTAGAAAAGGCTCACTCAAGTACAAGAGCCAAGGGGTCATCAACAGCCTGTATCATTGCCCTTGCTGAGAAGGAGCTACATGCTATTAATTTGGGTGACAGTGGATTCATCGTGGTTAGAGATGGAAGCACCATTTTCAAGTCCCCTGTTCAACAGCATGGCTTCAATTTTACATATCAATTGGAGAGTGGCTATGGAGGTGATTTACCAGGTTCTGGCGAGGTGTTTACAGTGCCTGTTGCCGGAGGAGATATTGTGATTGCCGGGACAGACGGATTATTTGACAACTTGTATAATAAAGAAATTACAGCAGTTGTTGTACATGCAGTTAGAACGGGACTAGAACCCCAAGTAACTGCGCAGAAGATAGCAGCGCTGGCCCGTCAGCGAGCACAAGACAGAAATAGGCAGACTCCATTTTCTGCCGCTGCTCAAGAGGCCGGCTTCCGGTATTATGGTGGCAAGCTCGATGACATTACAGTTGTTGTATCATACATAACCTCAGCAAACTCCTGA 1062 0.4454 MILTSCSNTLDFPGAVSLGDRTGKGCLRPHLNLKRKDSLNNALNIRYLTLDGISSFPHRPWLKNFSSTYCTSYFARAAHNVSFDSSVCDEQLENSSPTVEPTIDGSETLRLFSGSSYLPHQETGGEDAHFICPDEQAFGVADGVGGWAEVGVNAGLFSRELMSNSVRAIQDEPKGCINPARVLEKAHSSTRAKGSSTACIIALAEKELHAINLGDSGFIVVRDGSTIFKSPVQQHGFNFTYQLESGYGGDLPGSGEVFTVPVAGGDIVIAGTDGLFDNLYNKEITAVVVHAVRTGLEPQVTAQKIAALARQRAQDRNRQTPFSAAAQEAGFRYYGGKLDDITVVVSYITSANS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1364 353 FunFam 5-azacytidine resistance protein azr1 118 242 - -
Lele56g1364 353 SUPERFAMILY PP2C-like 120 345 IPR036457 -
Lele56g1364 353 Gene3D - 93 239 IPR036457 -
Lele56g1364 353 ProSiteProfiles PPM-type phosphatase domain profile. 112 348 IPR001932 -
Lele56g1364 353 Gene3D - 252 352 IPR036457 -
Lele56g1364 353 Pfam Stage II sporulation protein E (SpoIIE) 136 346 IPR001932 -
Lele56g1364 353 SMART PP2C_4 106 346 IPR001932 -
Lele56g1364 353 PANTHER PROTEIN PHOSPHATASE 2C 94 352 IPR039123 -
Lele56g1364 353 SMART PP2C_SIG_2 122 348 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1364 Lele-ChrLele56 16800036 16802914 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0201 50 1184881 1186986 Lele56g1364 56 16800036 16802914 CCT
Lele51g0201 51 1136982 1140277 Lele56g1364 56 16800036 16802914 CCT
Lele52g0203 52 1207015 1208161 Lele56g1364 56 16800036 16802914 CCT
Lele49g0183 49 1105729 1110925 Lele56g1364 56 16800036 16802914 CCT
Lele56g1364 56 16800036 16802914 Lele56g1364 56 16800036 16802914 ECH
Lele55g1432 55 20557656 20560563 Lele56g1364 56 16800036 16802914 ECH
Lele53g0065 53 507987 510883 Lele56g1364 56 16800036 16802914 hybridization
Lele54g0067 54 549235 552359 Lele56g1364 56 16800036 16802914 hybridization