Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1355 ATGGTTTACGACGTCGTCTCGCCTGCAATCGGTAACACCTCCACCGTCGTCCGCAACCTCGGCTTCTATCTATCGGAGCATCCGGCGATCGTTAATTTCCGTTGGAGCCACACCCAGTCATGGGGTTCCACATGGCCATTCCTCTTCACCTCCATAGCCGCATATCTCTTTATCTCTCTCTTTCTCCATCGATTTCTGGCTCTCCTCCTCCGCCCGACCCGCACCGTTCCTCTCGGGCCCATACCCGCTCTTCATAGCCTACTCATGTCCCTCATCTCCATCACAATTTTCGCCGGAATATTAGTCTCCGCCGCCGCCGAGATAAGAGACACCCGTTGGTTCTGGCGAGGCTCGAAGACTCCATTCCAATGGCTGCTCTGTTTTCCGCTGGGCACTCGACCCTCGGGAGGGGTCTTCTTCTGGTCATACGTGTACTACTTGTCTCGATTCCTACACATGTGGAGGACGATCTTCACGATTCTACGACGTCGTAAACTGGTGTTGTTCCAGCTGTTCAACAACTCCATCTCGATCTTCGTGTCATTCTTGTGGCTGGAATTTTCGCAGTCGTTTCAAGTGGCGGCGATCCTAGCGACGACTCTGGTGTACTCGGTGGTGTACGGGTACAGATTCTGGACGGCGATGGGGCTGAGGAGTGCGTGCTTTCAACTGGTGTTGAATTGCCAAGCTGTGTTGGTGGGTTGCAACGTGGCGTGCCATGTCGGAGTGTTGTTGCTTCACTTCTTCCGCGGCGGATGCAACGGAATGGGCTCCTGGATATTTAATTCGGTGCTGAACGTCGGTGTTCTGTTGGTGTTTCTGAATTTTTACGTGAGATTACGGGCCAATGGCCGGAAAAGTGGCAAGGTTGAGGGCGAGTCCACGCCTCATGCTTGTGGTCATCAAAGGTTGGCCAGCAGGAGTGTAGCAGAAATGGACAAGACAATTATGAGTTGA 957 0.5329 MVYDVVSPAIGNTSTVVRNLGFYLSEHPAIVNFRWSHTQSWGSTWPFLFTSIAAYLFISLFLHRFLALLLRPTRTVPLGPIPALHSLLMSLISITIFAGILVSAAAEIRDTRWFWRGSKTPFQWLLCFPLGTRPSGGVFFWSYVYYLSRFLHMWRTIFTILRRRKLVLFQLFNNSISIFVSFLWLEFSQSFQVAAILATTLVYSVVYGYRFWTAMGLRSACFQLVLNCQAVLVGCNVACHVGVLLLHFFRGGCNGMGSWIFNSVLNVGVLLVFLNFYVRLRANGRKSGKVEGESTPHACGHQRLASRSVAEMDKTIMS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1355 318 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 24 279 IPR002076 GO:0009922|GO:0016020
Lele56g1355 318 Pfam GNS1/SUR4 family 43 280 IPR002076 GO:0009922|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1355 Lele-ChrLele56 16721885 16722841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1355 13 266 Acyl Lipid Metabolism Gene Families AT4G36830 66.148 8.84e-121 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele56g1355 56 16721885 16722841 Lele49g0189 49 1129608 1132689 CCT
Lele56g1355 56 16721885 16722841 Lele50g0205 50 1206234 1207838 CCT
Lele56g1355 56 16721885 16722841 Lele51g0205 51 1155735 1157314 CCT
Lele56g1355 56 16721885 16722841 Lele52g0208 52 1226869 1228496 CCT
Lele56g1355 56 16721885 16722841 Lele56g1355 56 16721885 16722841 ECH
Lele55g1423 55 20483816 20484772 Lele56g1355 56 16721885 16722841 ECH
Lele53g0075 53 582019 582800 Lele56g1355 56 16721885 16722841 hybridization