Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1348 ATGGGTTGGTTTACAAAGTTGATTAAGGGCTCCAACCATGAGATTTCAAGGGGGCAATATCATGGGAAATATGGAAACGACACAATTTGGGATGACCATCGTAATTCAGTGGATGATTTGACTGATATTGAAAAAGAAGACATTGATCGAGCAATTGCACTCTCTCTATCAGAGGATCAGAAAGGGAAAAAGGTTATTGAGTATGACTCAGAGTCAGAAGATGAAGAACTTTGTCCACTTGATGATGAGGAAGACGAACATCTTGGTAAAGTTCATGAAGAGGAAGCTGAAAGTCTTGATAGCATTCAAAACGATGAAGATGAGCATCACGCAAAACTTCAACTTGAGGAAGATGAACAACTTGCCAGAGCAATTCAAGAAAGTTTAAGCATGGGTTCTCCTCCTCGATATGACGCGGGCTCTATATTTCAACCATTTTCTCTATTTTCCACTGGATACAGGGTCTGTGCTGGCTGCAACGCTGAGATTGGCCATGGAAGATTTTTAAGCTGTATGGGAGGTGTCTGGCATCCAGAATGTTTTCTTTGTCAAGCTTGCAATCTTCCAATTACTGATTATGAGTTTTCCATTTCTAGCAATCGCCCTTACCACAAATCCTGCTACAGGGAGAAGCATCACCCAAAATGTGATGTTTGCAAGAATTTTATTCCAGCAAATTCAGCCGGCCTCATTGAATATAGAGCACACCCTTTCTGGCTACAAAAATACTGTCCATCACATGAACGTGATGGCACTCCTCGCTGTTGTAGCTGTGAAAGAATGGAGTCAAGGGACGCGAAATATCTTTTGCTGGATGATGGCCGGAAGCTATGTCTAGAGTGTCTAGACTCTGCAATTATGGATACTCATGAATGCCAGCCACTTTACCTTGAAATACAAGAGTTTTATGAAGGTTTAAACATGAAAGTGGAGCAACAAATTCCTATGCTTTTGGTTGAGAGACAAGCACTGAATGAGGCCATGGAGGGAGAAAAGAATGGTCATCACCACTTACCTGAAACTAGAGGACTTTGCTTGTCAGAAGAGCAGACCGTCACCACTATTTTAAGGAGACCAAGGATCGGAGCAGGCCATAGAATCATGGACATGATAACTGAACCTTATAGGCTGATCCGTCGCTGTGAAGTTACTGCCATTCTTGTTTTATATGGCCTTCCAAGGTTGTTAACAGGATCAATCCTTGCTCATGAGATGATGCATGCATGGCTCAGGCTTAAAGGTTACCCCAATCTGAGCCCCGAAGTTGAAGAAGGAATTTGCCAAGTTTTGGCTCATATGTGGTTAGATTCAGAAATATATTCTGGATCTGGGGGCGATGGCGCATCGTCCTCCTCGGCGTCTTCATCATCATCCTCACCTTCCTCCTCTTCCTCCACGTCGTCAAAGAAGGGCAAAAGGTCCGACTTCGAGAAGAAACTGGGCGAGTATTTTAAACACCAGATTGAGTCAGATACCTCATCAGCATATGGAGATGGATTCAGATTGGGTAACCAGGCAGTGCTCAAGTATGGGCTCAGAAGGAGCCTTGACCATATCCAACTGACAGGAAGTTTTCCATTATGA 1584 0.4337 MGWFTKLIKGSNHEISRGQYHGKYGNDTIWDDHRNSVDDLTDIEKEDIDRAIALSLSEDQKGKKVIEYDSESEDEELCPLDDEEDEHLGKVHEEEAESLDSIQNDEDEHHAKLQLEEDEQLARAIQESLSMGSPPRYDAGSIFQPFSLFSTGYRVCAGCNAEIGHGRFLSCMGGVWHPECFLCQACNLPITDYEFSISSNRPYHKSCYREKHHPKCDVCKNFIPANSAGLIEYRAHPFWLQKYCPSHERDGTPRCCSCERMESRDAKYLLLDDGRKLCLECLDSAIMDTHECQPLYLEIQEFYEGLNMKVEQQIPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTTILRRPRIGAGHRIMDMITEPYRLIRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGYPNLSPEVEEGICQVLAHMWLDSEIYSGSGGDGASSSSASSSSSSPSSSSSTSSKKGKRSDFEKKLGEYFKHQIESDTSSAYGDGFRLGNQAVLKYGLRRSLDHIQLTGSFPL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1348 527 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 183 238 - -
Lele56g1348 527 MobiDBLite consensus disorder prediction 446 469 - -
Lele56g1348 527 ProSiteProfiles LIM domain profile. 154 214 IPR001781 -
Lele56g1348 527 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 149 181 - -
Lele56g1348 527 Coils Coil 99 119 - -
Lele56g1348 527 Pfam LIM domain 156 211 IPR001781 -
Lele56g1348 527 PANTHER PROTEIN DA1-RELATED 2 3 526 IPR045218 -
Lele56g1348 527 CDD LIM_DA1 156 208 - -
Lele56g1348 527 Pfam Protein DA1 305 521 IPR022087 -
Lele56g1348 527 ProSitePatterns LIM zinc-binding domain signature. 156 190 IPR001781 -
Lele56g1348 527 Gene3D Cysteine Rich Protein 147 214 - -
Lele56g1348 527 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 116 135 IPR003903 -
Lele56g1348 527 SMART lim_4 155 207 IPR001781 -
Lele56g1348 527 MobiDBLite consensus disorder prediction 446 473 - -
Lele56g1348 527 FunFam Protein DA1-related 1 150 209 - -
Lele56g1348 527 SMART uim 43 62 IPR003903 -
Lele56g1348 527 SMART uim 116 135 IPR003903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1348 Lele-ChrLele56 16685197 16689280 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele56g1348 DA1-like 6.9e-106 CL0126