Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1345 ATGTGTGAGTGTGAGAGAGGGAGAGAGAAGAAATTGAACAAGCTTTCAATACCGCAGAAGGGAAAACGATGTCTGAGAGCTTTACATCCTTTCATACCCTGCAACTCTAAGAGTAAGTTGAGGAGAGAAGAAGAAGACGACGACGACAATGATGAACAAGATTTTAACATGGGAATAGCAACACCGCCAATTCTTCCGCCTATTCTGTCTCACTCCTTCGCCAGGTCCCACCATTCATTTTCTTCTGTATTAGACTCCAATTCTATGTCCCAAGATTATCACCAAGGAATCTTCACCTTCTCGAATGGGTTCGAGAGATCCACTCTAACTCAGCAGCAGCAGCAACAGTTAGCGCAGCAGATCAGGAGAGACAAGGTGAGGGTGCAAGCCGGGTTGGACCCGCCGCCGCCGCTAGTGGGTATAGAGGAAGAAGAATCTGGAAACCTTCCTGTTTATGAAACCGGAGGGATGTTATCCGAGATGTTCAATTTCCCTCCTCCCGGCGCCCCCGCCACTGAATTGTTGGAACAACAACACCAGCAACCCGCTGCGACGGCGATGTATCGGGCCTCCAGGCCGCAGCCAGTGACCACTGATTGGTACAGACAAGGGATGTTAAGCGGGTTGGGAGATTCAAAGAATCAGAATAGCCGTGACAATAGTAGTATACTAGAGCAACATCATCATCCTCAGATTTCAAGCATGAATGCGGACTCAGCTGCCGCCATGCAGCTTTTTCTGATGAACCCACAAACAAGATCGCCTTCTCCTACTACTCAGAATCACACTACCCCTAATTCAACTTCTCTCCAAGGCTTCAGTACTCATCAAGGAGGGGGTTTCGGTCAATTCACATGGCTTCCCCATAGTTCTCAGCAAGGAGCACCGACCACGGCCGGTAATCCACCTCAAATTGGAGGGGTTATGGAAGCTCAAGGTCTTTCCTTATCGTTATCGTCGTCGTTGCAACACTTGGAAGCGGCGAAAGCTGAGGAATTGAGGATGGGAGACAGCGGGTTTCTGTATTACAATCAAGGATCCGGAGGGTCTTCGTCTGCTCAGTATCCGTACAAGACATTGCATTTCCAAGGGCCAGTCGGAGCAGGTCAGAACCAACAGGGATATGTCGGGTTTGGGTCATCATTAGGGGTGGTGAACGTGCTGAGGAATTCAAAGTACGTGAAAGCTGCACAAGAATTGCTCGAAGAATTCTGTAGTGTTGGGAGGGGTCAGTTCAAGAGGAACAAGTTCAGCAGGCAAAACTCAAACCCTAGTTCCACCCCTGGCGGTGGCTGCGGTGGCGGTTCTTCGTCTTCATCTAAGGATCTCCCTCCTTTGTCATCGGCCGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTGCTATCCATGCTTGACGAGGTGGATAGGAGATACAACCACTACTGCGAGCAAATGCAAATGGTGGTGAACTCATTCGACATGGTGATGGGATTCGGGTCTGCGGTGCCATACACGACGTTAGCTCAGAAGGCCATGTCACGCCATTTCCGGTGTCTGAAGGATGCGATAACGGTGCAGCTGAAGCACAGTTGTGAGTTGCTGGGGGAGAAAGACGGAGCAGGAAGCTCAGGGATAACCAAGGGAGAGACACCAAGACTGAAACTTCTGGAACAAAGCCTGAGACAGCAGAGAGCCTTCCACCAGATGGGCATGATGGAACAAGAAGCCTGGCGACCCCAAAGAGGCCTCCCTGAGAGATCCGTCAATATTTTGCGAGCCTGGCTCTTCGAGCACTTTCTTCATCCGTATCCAAGCGATGCAGATAAGCATCTGTTGTCTCGACAGACTGGCCTCTCGAGAAATCAGGTATCGAACTGGTTCATTAATGCCAGGGTCCGGCTGTGGAAACCTATGGTAGAAGAAATGTACCAACAAGAACTTAAAGAAGCAGAAGAAGAAGAAGAGAGAGAAGAAAGGAACCAAAGCAGCAACAACAACACCAGTAACCTCGCACAAACTCCAACCACAGCAGCAGCAACTTCAACAGAAGCAGCGCCACCATCATCCACAACAACAACACCAACAACGACACTCACAATAACAGCTGCTGCAGCTGGCAAAGGATCCCAAATCAATGCTTCTGATAGCGACCTTTCACTCATTTCAATCAATACCCAGCCCTTCTCGGAATCCCAACCACACCACTCTCCCTCTGCCATCACCACCGCTCCTACCGCCGCACTTGCCGCCACTTCTGAGGTGGCGCCACCCTCGTCTCAGTGTTATGACTCAGGCCTGGCCCCTCACATATCAATACCTGCAGATGACACGTGTCGCCACGGCAGCCTCATTGCAGCAGATTATGGGACCGCCTCTGGTAATTCTGACATTGGTTCTACTCTCATTAGGTTTGGGACCGCCGCCGGTGATGTTTCCCTCACCCTAGGGCTACGTCACGCCGGCAACATCCCGGAGAAAACCCCTCCTTTCTCTGTTAGAGACTTCGGAGGCATTTGA 2499 0.5058 MCECERGREKKLNKLSIPQKGKRCLRALHPFIPCNSKSKLRREEEDDDDNDEQDFNMGIATPPILPPILSHSFARSHHSFSSVLDSNSMSQDYHQGIFTFSNGFERSTLTQQQQQQLAQQIRRDKVRVQAGLDPPPPLVGIEEEESGNLPVYETGGMLSEMFNFPPPGAPATELLEQQHQQPAATAMYRASRPQPVTTDWYRQGMLSGLGDSKNQNSRDNSSILEQHHHPQISSMNADSAAAMQLFLMNPQTRSPSPTTQNHTTPNSTSLQGFSTHQGGGFGQFTWLPHSSQQGAPTTAGNPPQIGGVMEAQGLSLSLSSSLQHLEAAKAEELRMGDSGFLYYNQGSGGSSSAQYPYKTLHFQGPVGAGQNQQGYVGFGSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKRNKFSRQNSNPSSTPGGGCGGGSSSSSKDLPPLSSADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDMVMGFGSAVPYTTLAQKAMSRHFRCLKDAITVQLKHSCELLGEKDGAGSSGITKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLSRQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKEAEEEEEREERNQSSNNNTSNLAQTPTTAAATSTEAAPPSSTTTTPTTTLTITAAAAGKGSQINASDSDLSLISINTQPFSESQPHHSPSAITTAPTAALAATSEVAPPSSQCYDSGLAPHISIPADDTCRHGSLIAADYGTASGNSDIGSTLIRFGTAAGDVSLTLGLRHAGNIPEKTPPFSVRDFGGI 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1345 832 Gene3D - 574 636 - -
Lele56g1345 832 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 254 658 - -
Lele56g1345 832 SUPERFAMILY Homeodomain-like 573 638 IPR009057 -
Lele56g1345 832 MobiDBLite consensus disorder prediction 656 689 - -
Lele56g1345 832 SMART HOX_1 571 635 IPR001356 GO:0003677
Lele56g1345 832 Pfam Homeobox KN domain 588 627 IPR008422 GO:0003677|GO:0006355
Lele56g1345 832 FunFam BEL1-like homeodomain protein 4 574 636 - -
Lele56g1345 832 MobiDBLite consensus disorder prediction 250 300 - -
Lele56g1345 832 Coils Coil 634 661 - -
Lele56g1345 832 MobiDBLite consensus disorder prediction 250 308 - -
Lele56g1345 832 CDD homeodomain 571 632 IPR001356 GO:0003677
Lele56g1345 832 MobiDBLite consensus disorder prediction 640 689 - -
Lele56g1345 832 MobiDBLite consensus disorder prediction 415 445 - -
Lele56g1345 832 ProSiteProfiles 'Homeobox' domain profile. 568 631 IPR001356 GO:0003677
Lele56g1345 832 SMART prehox3 382 519 IPR006563 -
Lele56g1345 832 MobiDBLite consensus disorder prediction 415 450 - -
Lele56g1345 832 Pfam Associated with HOX 387 518 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1345 Lele-ChrLele56 16643924 16649768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1345 83 618 Homeobox Transcription Factor Family AT4G36870 49.751 1.13e-141 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele56g1345 POX 1.7e-51 No_clan