Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1342 ATGACACGTGCACAAGGGAGCGCATGCTATCCTGAGATTAGGGAATTAGATCGGAGCAATTACTGCAGAATGGGTAATTGCAGCTCCGGCAATATGGTGCAGGTGCCGACGGCGAGGCTTATTCTGGAAGACGGACAGCTCCGGGAGTTCCCTTACCGGGTGAAGGTTTCCTACCTGTTGCAGAAGTACCCGATGTGTTTTATTTGTGACTCCGACGAGATGGACTTCGACGACGTCATGACGCCTATGGACGAGGACGAAGTGTTACAGCCGGGTCAGCTGTATTTCGCTTTTCCGTTGAGTCGGCTGAATCACCCCTTAAGGGCGGACGAGATGGCCGCATTGGCGGTGAAGGCCAGCTCGGCACTCATGAAAAGTGGAAGCGATGAGAAATACATTTGTCGTCTGACACAGATTGTGGTTCCCGGCGATGAAAACTCCAAGTCGTGTCGTACAGTTTCTCACAGGGTCAGTGGCGCTCGCGGTGTAGGTCGATCAAAAATAGGAAGAAGTAGAAGTGGCGGTAGTGGTGATCATTGGGCCAAGTCTCCGGCAACGTTGAGCACCATACCGGAGTAG 579 0.5285 MTRAQGSACYPEIRELDRSNYCRMGNCSSGNMVQVPTARLILEDGQLREFPYRVKVSYLLQKYPMCFICDSDEMDFDDVMTPMDEDEVLQPGQLYFAFPLSRLNHPLRADEMAALAVKASSALMKSGSDEKYICRLTQIVVPGDENSKSCRTVSHRVSGARGVGRSKIGRSRSGGSGDHWAKSPATLSTIPE 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1342 192 Pfam PADRE domain 24 192 IPR025322 -
Lele56g1342 192 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 24 161 - -
Lele56g1342 192 MobiDBLite consensus disorder prediction 161 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1342 Lele-ChrLele56 16618287 16619123 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele56g1342 56 16618287 16619123 Lele49g0208 49 1237238 1240611 CCT
Lele56g1342 56 16618287 16619123 Lele50g0220 50 1314140 1317007 CCT
Lele56g1342 56 16618287 16619123 Lele51g0222 51 1250269 1253880 CCT
Lele56g1342 56 16618287 16619123 Lele52g0224 52 1333948 1336842 CCT
Lele54g0090 54 748847 749356 Lele56g1342 56 16618287 16619123 hybridization