Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1335 ATGAAGAATTACTCCTCCAACTGCCACAGACATTTATTTCGACGATTGCGGGATGCTCGAAGGTTTCAGAAGATGTTTGGCAATGCTGGTTGTTCAAAACCCAGTGCAAACCAATTCAATTACCATCCAGAGATGTCCTATCCCCGGAGGAACTTCATTTTCGTGCTCACGATCTTCATCGTCTACTCAACTAGAGCAGAAAAGTCGAGCGACTGTGATCTCAGTTGTGGAAAGTATTCCGTGCTGTATCCTTTCGGATTCTCTGAGAAGTGCCAGATCAAATTAAATTGCAGCGACAGCCACATGGAAATTGGGGGATTCAAGGTGGAGAAAGTAACCCCAAGTAGTATCTTTGTCAATCTTCCTGTGAAATGCAAACGACGCATGGAATCTATCCAACGCCTTTTCAGTAAAAACTTCGCTCCCACACGGAACAATAGCCTTCTGGTTCAAAGTTGTTCGTCTCAGCAGGGCAGCTGCTTTATACCCACCTCCAGTCTCATCAGCAGTCTATTGAAGTTGGACAATTGCCATAGTGGTAACATCAGTTGCTTCTTGCAAAAAAAGGATGATACAGATGTTCTGACACAAGCGGAAGTAAATCAGACTACGTGCAAGTTGATATCTGCGATTGCAATCGAGCAAGGCAAAGACCCGACGATTTCGCTCCATCTTCAGGTGCTTGAATTGGGGTGGTGGCTTGAAGGTCCACCCGGATGCTCTGAGAATGCAACCCTTACCACAGTCCAACGACCTGGCAGGAAGACTGGGTACCGGTGCCAATGTCATGAAGGTTACATCGGAGATGGCTTCAAGAACGGCACTGGTTGTCGGAAAGTTTCACAGTGCAAAGCCGCAACACTAATGACTGGTGGATGTGGAAAAGCAACTAAAATCGGTGTTCTTGTTGGAGGGATCGTTGCTGTAGCTTTCATCCTGACTGGTGTGTGTCTTCGATGTCACTTTGCTCGGCGTCGTTATGCTTGTTTGAGCAAACAAATGACAGTTAAGCGCCTATTACGGGAAGCTGCAGGCAACACTATTGTTCCTTTTTACCCGTACAAAGAAATAGAAAAAGCCACTAATTTTTTCTCCGAGGAACAGAGGTTGGGAACTGGGGCTTTTGGTACGGTATATGCAGGAAAATTACACGATAATGAATGTGTTGCAATAAAAAAGATCAAGTATAGAGACACCAACAGCGTTGACCGAGTTTTGAACGAGATCAAACTTCTTTCTTCAGTGAGTCACCCTAATTTAGTACGCCTCTTGGGCTGCTGCATAGAGGGTGGTGAGCAGATACTTGTTTATGAGTTTATGCCCAATGGAACACTATCCCAACATTTACAGAGAGAGAGAGGAACTGGACTTCCATGGACAATAAGACTAACCATTGCTACTGAAACCGCTAATGCTATAGCACATCTTCATTCTGCCATTGATCCCCCAATTTATCACAGGGACATAAAATCCAGTAATATACTCTTGGATTACAACTACAAATCGAAAGTAGCAGATTTTGGGCTTTCTAGGCTCGGCATGCCAGAAACATCACATATCTCAACTGCTCCACAAGGGACTCCAGGCTATGTCGACCCTCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTCTATAGTTTTGGAGTGGTTTTGGTAGAGATAATAACGGCCCTGAAAGTGGTTGATTTTGCACGACCTCATAGTGAGGTTAATTTGGCTGCACTTGCTGTGAATAGGATCAGAAGAGGTTCTGTTGATGAGATCATAGATCCTTTTCTGGAGCTTCACAGGGATGCTTGGACCCTTTACTCTGTTCACAAGGTGGCTGAGCTTGCATTTAGATGCCTTGCTTATCATAGTGACATGAGGCCTACTATGTTGGAAGTAGCAGAGGAGCTGGAGCATATCAGACGCAGTGGATGGGCAACAATGGAAGAAACTCTATGCACGGCATCGTCGATTGGATCCTCGTGTTCGTCACCTCGCATTGGAAGTGAGAAGTCGATGGATCGTATTATTTCTCTTAAAAAAGCAGAACGAGGGAGCAAGAGATCGATGAGTCAAAAAAAGATGGATAAACGACACCATTCTGTGGAAGAAGCGAAGGATAGCTCTCCTATATCAGTGCATGATCCTTGGTTAAGTGGACAAAGCTCACCCTCAGCAAACAGCTTGTTGGGGAATGTGGTTCAGTGA 2205 0.4481 MKNYSSNCHRHLFRRLRDARRFQKMFGNAGCSKPSANQFNYHPEMSYPRRNFIFVLTIFIVYSTRAEKSSDCDLSCGKYSVLYPFGFSEKCQIKLNCSDSHMEIGGFKVEKVTPSSIFVNLPVKCKRRMESIQRLFSKNFAPTRNNSLLVQSCSSQQGSCFIPTSSLISSLLKLDNCHSGNISCFLQKKDDTDVLTQAEVNQTTCKLISAIAIEQGKDPTISLHLQVLELGWWLEGPPGCSENATLTTVQRPGRKTGYRCQCHEGYIGDGFKNGTGCRKVSQCKAATLMTGGCGKATKIGVLVGGIVAVAFILTGVCLRCHFARRRYACLSKQMTVKRLLREAAGNTIVPFYPYKEIEKATNFFSEEQRLGTGAFGTVYAGKLHDNECVAIKKIKYRDTNSVDRVLNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLQRERGTGLPWTIRLTIATETANAIAHLHSAIDPPIYHRDIKSSNILLDYNYKSKVADFGLSRLGMPETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARPHSEVNLAALAVNRIRRGSVDEIIDPFLELHRDAWTLYSVHKVAELAFRCLAYHSDMRPTMLEVAEELEHIRRSGWATMEETLCTASSIGSSCSSPRIGSEKSMDRIISLKKAERGSKRSMSQKKMDKRHHSVEEAKDSSPISVHDPWLSGQSSPSANSLLGNVVQ 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1335 734 SUPERFAMILY Protein kinase-like (PK-like) 346 637 IPR011009 -
Lele56g1335 734 SMART serkin_6 364 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1335 734 MobiDBLite consensus disorder prediction 713 734 - -
Lele56g1335 734 FunFam Wall-associated receptor kinase-like 20 440 649 - -
Lele56g1335 734 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 53 720 IPR044652 GO:0004672
Lele56g1335 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Lele56g1335 734 ProSitePatterns Protein kinases ATP-binding region signature. 370 393 IPR017441 GO:0005524
Lele56g1335 734 MobiDBLite consensus disorder prediction 681 734 - -
Lele56g1335 734 MobiDBLite consensus disorder prediction 681 709 - -
Lele56g1335 734 Gene3D Transferase(Phosphotransferase) domain 1 440 658 - -
Lele56g1335 734 Gene3D Phosphorylase Kinase; domain 1 327 439 - -
Lele56g1335 734 FunFam Wall-associated receptor kinase-like 14 331 439 - -
Lele56g1335 734 CDD STKc_IRAK 370 639 - -
Lele56g1335 734 Pfam Protein kinase domain 365 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1335 734 ProSiteProfiles Protein kinase domain profile. 364 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1335 Lele-ChrLele56 16585127 16589265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1335 52 732 Receptor kinase-like Gene Family AT2G23450 54.257 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele56g1335 Pkinase 4.7e-44 CL0016