Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1330 ATGATGAAGGCCACCGTGGCTATGAAGTATTATTATTACAACACTTTGGCGTTGCTATTATTTTGTCTTTTGTATCATTGTGTAGTGGCTGCTAAACATGAAGGGTTAGGAGCGTCTTTTATATTTGGAGATTCATTGGTAGATGCAGGAAACAATAATTATCTTCCAACTCTTTCAAAGGCAAATATTCCTCCTAATGGTATCGATTTTAAGGCCACTGGTGGAAGTCCCAGCGGTCGATTCACTAATGGAAGAACCATTGCTGACATTGTTGGAGAGGAGCTTGGACAACCACATTATGCAGTCCCATTTTTGGCTCCAAACGCAACCGGCAAAGCTTTGCTGTATGGAGTAAACTACGCTTCAGGAGGAGGAGGGATTCTTAACGCAACTGGAAGAATCTTTGTGAATAGGGTTGGAATGGATGTTCAGATAGATTACTTCAGCATAACACGAAAAGAGATTGATAAATTGCTAGGCAAGGAAAAAGCGAGGGAATACCTTATGAAGAAATCCATTTTCTCAATCACAGTTGGATCAAATGATTTCCTCAACAACTATCTTCTCCCAGTTCTCTCCGTCGGAGCCAGAATCTCTCAGAGCCCAGACGCCTTTATCGACGATATGATCACTCACTTGAGATCCCAGCTTACCAGCCTTTACCAGCAGGATGCTCGGAAATTTGTGATCGGAAACGTTGGTCCTATAGGATGCATTCCCTACCAGAAAACGATAAACCAGTTGAACGAAGATGAGTGTGTGGATCTGGCTAACAAGCTCGCTCGTCAATATAATGAAAGGCTCAAGGATTTGCTTGCTGAGCTTACTGACAACCTTCCCGGAGCAACGTTCGTGCATGCAAATGTCTACGACTTAGTCTTAGAACTCATCAGAAACTACAAAAACTATGGGTTTGTGACAGCAAGCAAAGCATGCTGTGGAAATGGGGGTCAATTTGCAGGGATAATACCGTGTGGACCAACATCAAGCATGTGTTCAGACAGGTACAAGCATGTGTTCTGGGATCCTTATCATCCGAGTGAAGCAGCAAACCTAATACTCGCCAAACAGCTTCTGGATGGAGACAAGAGATCCATATCTCCTATGAATCTTAGGCAACTTCTAGACCTCTGA 1134 0.4321 MMKATVAMKYYYYNTLALLLFCLLYHCVVAAKHEGLGASFIFGDSLVDAGNNNYLPTLSKANIPPNGIDFKATGGSPSGRFTNGRTIADIVGEELGQPHYAVPFLAPNATGKALLYGVNYASGGGGILNATGRIFVNRVGMDVQIDYFSITRKEIDKLLGKEKAREYLMKKSIFSITVGSNDFLNNYLLPVLSVGARISQSPDAFIDDMITHLRSQLTSLYQQDARKFVIGNVGPIGCIPYQKTINQLNEDECVDLANKLARQYNERLKDLLAELTDNLPGATFVHANVYDLVLELIRNYKNYGFVTASKACCGNGGQFAGIIPCGPTSSMCSDRYKHVFWDPYHPSEAANLILAKQLLDGDKRSISPMNLRQLLDL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1330 377 Coils Coil 254 278 - -
Lele56g1330 377 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 19 374 - -
Lele56g1330 377 CDD SGNH_plant_lipase_like 38 362 IPR035669 -
Lele56g1330 377 Gene3D SGNH hydrolase 26 362 IPR036514 -
Lele56g1330 377 SUPERFAMILY SGNH hydrolase 42 360 - -
Lele56g1330 377 Pfam GDSL-like Lipase/Acylhydrolase 40 357 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1330 Lele-ChrLele56 16560531 16562184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1330 38 375 Acyl Lipid Metabolism Gene Families AT4G10950 34.218 2.56e-65 211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0230 49 1360214 1365108 Lele56g1330 56 16560531 16562184 CCT
Lele53g0101 53 744333 746138 Lele56g1330 56 16560531 16562184 hybridization
Lele54g0102 54 813284 814924 Lele56g1330 56 16560531 16562184 hybridization