Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1321 ATGACGTGTTCAAAATTCTCATTTTCCTTTGCAGGCTTAAATTGTCTTTTAAATCATCAGGTATCAATCAGACAGCAAAATCAGCCAAGCCCAACTTCCAGGGATTCTGTTTTTAGTGTTGCGTTTGTTAAAAATAAATACGAGGTGAATCACCGTCTCTTTGACCATCCGGATTATGCTGAGATCGTTGTAATACGTCATGGGGAAACAGCATGGAACGCTGATGGAAGAATACAGGGGCATCTGGATGTTGAGTTAAATGAAGCTGGAAGAGCGCAAGCAGCTGCAGTGGCTGAAAGACTATTTAGGGATCCAAAGTTCTCTGCTGTGTATTCTTCTGACTTGCAACGAGCTTATGAGACAGCACAGATCATTGCAATCAAATGTGGAGGGCTAGAGGTCGTCAAAGACCCTGACCTAAGGGAAAGACACCTAGGGGATCTTCAAGGTCTTTCCCGTCGGGAAGCATCAAAGACTAATCCCACAGCTTACAGAGCTATGGATCGAGGTGAAGAAATACCAGGTGGTGGAGAAAGTCTTGATCAACTTTCCAAGCGCTGCACATCTGTATTGCAGAGGATAGGCATGAAGCATTTAGGGGAGCGGGTAGCAGTTGTTAGTCATGGAGGTGCCATTAGATCACTTTACAGGAGGGCCAATAACAAAAACAAGCGTTGTGGGATGATACTCAACACGTCTGTGAACGTGTTTCACTTGTATGAAGACAAGTGGATTATAAAATCTTGGGGGGATGTTAGCCATCTGACGCAAACAGGATTTCTGCAGTCTGGTTTTGGTGGTGACAAAACTTCTGGTTAG 819 0.4432 MTCSKFSFSFAGLNCLLNHQVSIRQQNQPSPTSRDSVFSVAFVKNKYEVNHRLFDHPDYAEIVVIRHGETAWNADGRIQGHLDVELNEAGRAQAAAVAERLFRDPKFSAVYSSDLQRAYETAQIIAIKCGGLEVVKDPDLRERHLGDLQGLSRREASKTNPTAYRAMDRGEEIPGGGESLDQLSKRCTSVLQRIGMKHLGERVAVVSHGGAIRSLYRRANNKNKRCGMILNTSVNVFHLYEDKWIIKSWGDVSHLTQTGFLQSGFGGDKTSG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1321 272 FunFam - 60 134 - -
Lele56g1321 272 Pfam Histidine phosphatase superfamily (branch 1) 62 251 IPR013078 -
Lele56g1321 272 CDD HP_PGM_like 61 251 IPR013078 -
Lele56g1321 272 Gene3D - 54 259 IPR029033 -
Lele56g1321 272 SUPERFAMILY Phosphoglycerate mutase-like 61 256 IPR029033 -
Lele56g1321 272 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 58 245 - -
Lele56g1321 272 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 64 73 IPR001345 GO:0003824
Lele56g1321 272 SMART PGAM_5 61 215 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1321 Lele-ChrLele56 16488632 16492745 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0114 53 811683 826377 Lele56g1321 56 16488632 16492745 hybridization
Lele54g0111 54 890857 893032 Lele56g1321 56 16488632 16492745 hybridization