Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1319 ATGGGTCTCTGTACTTCAAAGCCCTCAGCAAATCTTACACCTTCGTCTCCCAAATGCGAAGCTGAATCGCCCAGGAATAACCCGGTACCACCTAGAGACGACTCTCTGCCTGTTAATGACTGTCCTCAACCTCATTCGAGCACTGTGAACGGAGAAAACCCCAGCAAGGAGAAGAAAGAGGCGGAGAATGGTAAAAAATCGCCTTTCTTCCCGTTTTACAGCCCAAGTCCGGCCCACTATTTGTTCTCCAAGAAGTCTCCCGCGAGATCTCCGGCGAATGGGAGCTCGAACTCCACGCCTAGGAGGTTCTTCAAACGCCCGTTCCCACCTCCGTCGCCGGCGAAGCACATAAAAGCTGTGTTGGCCAGGCGGCATGGGTCGGTGAAGCCGAATGAGGCGACAATAGCAGAAGGGAGCGAAGCAGAGGTTGTTGCTGGGCTTGATAAGAGTTTTGGATTTTCAAAGCATTTTGGGAACAAGTATGAATTAGGAGATGAGGTTGGTAGAGGTCACTTTGGGTACACTTGTGCTGCCAAGTTTAAGAAGGGCGAGCTCAAGGGACAACAGGTGGCTGTGAAAGTTATCCCGAAAGCAAAGATGACCACTGCCATAGCTATTGAGGATGTCAGAAGAGAAGTAAAAATATTGAGAGCTTTAACAGGACATAAGAATCTTGTACAATTCTACGATGCATACGAAGACCAGGATAATGTCTATATAGTTATGTGA 729 0.4842 MGLCTSKPSANLTPSSPKCEAESPRNNPVPPRDDSLPVNDCPQPHSSTVNGENPSKEKKEAENGKKSPFFPFYSPSPAHYLFSKKSPARSPANGSSNSTPRRFFKRPFPPPSPAKHIKAVLARRHGSVKPNEATIAEGSEAEVVAGLDKSFGFSKHFGNKYELGDEVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDQDNVYIVM 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1319 242 SUPERFAMILY Protein kinase-like (PK-like) 151 242 IPR011009 -
Lele56g1319 242 MobiDBLite consensus disorder prediction 83 111 - -
Lele56g1319 242 MobiDBLite consensus disorder prediction 88 102 - -
Lele56g1319 242 Gene3D Phosphorylase Kinase; domain 1 150 242 - -
Lele56g1319 242 MobiDBLite consensus disorder prediction 1 22 - -
Lele56g1319 242 ProSitePatterns Protein kinases ATP-binding region signature. 167 193 IPR017441 GO:0005524
Lele56g1319 242 FunFam CDPK-related kinase 1 154 242 - -
Lele56g1319 242 Pfam Protein kinase domain 161 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1319 242 PANTHER SERINE/THREONINE-PROTEIN KINASE 145 242 - -
Lele56g1319 242 MobiDBLite consensus disorder prediction 1 70 - -
Lele56g1319 242 ProSiteProfiles Protein kinase domain profile. 161 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1319 Lele-ChrLele56 16471943 16473789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1319 1 242 EF-hand Containing Proteins AT3G50530 72.428 1.48e-112 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele56g1319 Pkinase 4.5e-12 CL0016