Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1312 ATGGTGAGCAAGTGCAGAAGAATTGCAGAGGTTGTTGCAGTAATGGAAATGGCTCAGGTTGGGGTCACGACAAGAGCTCGAGCAGCGTTGGCCATGGGAGGATCTGCTGCTGCAACAGCATCAGGTGAAAGAAAACCCAAGAGAAGGAGGATCAACAGCGCAGAACTCAAATTCTCGGCGTCTTCATCTCTCGTTCAGCTTAAGGGAAGAAGTCAGCCTGATGTTATTCAACCGGAGACCGAGGAGCGATGCTCTAGTCCTTCCTCCAATGAACTCCCCTCGTCATCTTGTTCGAGCAATGGATCCATCGGACTTGATGAAGACAGAATCGAATTCGTAGATCTGGAGGTAGATAGTGCGCAAGTTGAAACATCGACATGTAATTGCGGTGACGAAAGAGAGATGAGCCCATCCAACGAGCTTCGAGGACCAAATTCAGAAAAAGCGAATAAGCCAACGGAGGCCGACACTCATTGTATATCAACAGTGCAAAAGATGCCAACGGAGCTGGAGCTCGAAGAATTCTTTTCTGCTGCGGAGAATGACATTCAGAAACGATTCTCAGAGAAATATTGTTACGACATTGTGAAGGACGTGCCGTTGTTGGAAGGGCGTTACGAGTGGGTTCAAATAAAGCCATGA 642 0.4798 MVSKCRRIAEVVAVMEMAQVGVTTRARAALAMGGSAAATASGERKPKRRRINSAELKFSASSSLVQLKGRSQPDVIQPETEERCSSPSSNELPSSSCSSNGSIGLDEDRIEFVDLEVDSAQVETSTCNCGDEREMSPSNELRGPNSEKANKPTEADTHCISTVQKMPTELELEEFFSAAENDIQKRFSEKYCYDIVKDVPLLEGRYEWVQIKP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1312 213 MobiDBLite consensus disorder prediction 64 101 - -
Lele56g1312 213 Pfam Cyclin-dependent kinase inhibitor 166 211 IPR003175 GO:0004861|GO:0005634|GO:0051726
Lele56g1312 213 MobiDBLite consensus disorder prediction 124 146 - -
Lele56g1312 213 Gene3D p27 160 213 IPR044898 -
Lele56g1312 213 MobiDBLite consensus disorder prediction 78 101 - -
Lele56g1312 213 MobiDBLite consensus disorder prediction 124 154 - -
Lele56g1312 213 PIRSF CKI_KRP_plant 1 213 IPR044275 GO:0004861|GO:0045736|GO:0051726
Lele56g1312 213 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 9 212 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1312 Lele-ChrLele56 16362784 16363915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1312 167 213 Core Cell Cycle Gene Families AT1G49620 68.085 2.85e-16 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0275 50 1624443 1625110 Lele56g1312 56 16362784 16363915 CCT
Lele51g0276 51 1574368 1574973 Lele56g1312 56 16362784 16363915 CCT
Lele52g0282 52 1680256 1680863 Lele56g1312 56 16362784 16363915 CCT
Lele49g0262 49 1541702 1543917 Lele56g1312 56 16362784 16363915 CCT
Lele53g0121 53 966956 968144 Lele56g1312 56 16362784 16363915 hybridization
Lele54g0120 54 1024300 1025437 Lele56g1312 56 16362784 16363915 hybridization