Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1305 ATGGACGTGGATGACAGAGGCATGGACATGATGGCAATGATGATGCAGATGGAGAAGTTTCCTGAATTCTCTGAACCTTTTTACCCATCAGAACCCCCATTCTCCACCACCACGGCCACCCCCAACAGTATGCCCATACTCTCCAATAACACGATCAATCATCCTCCACCATCTAATCATAATCCCTTTGTGGCAAACCCTATTAATCCAATCCCACAACCAGTGACACCACACCTGATTCAACCCAACAAAGACGTTGGGTTCAGGAATAATATTACTGATAATCCCAATGCTTGTTCTTCGTCTTCTTCTTCTTCTGAGAAGAAGAATTCTATGGCGGCCATGAGGGAAATGATATTTCGTATAGCAGTGATGCAACCCATTCACATAGAACCGGAATCCATCAAGCCTCCGAAGAGAAGGAACGTGAAGATATCCAAGGATCCGCAAAGCGTGGCGGCGAGGCACCGGAGGGAGAGAATAAGCGAGAGGATTAGGATTCTGCAGAGATTAGTTCCTGGAGGGACAAAAATGGACACGGCGTCAATGTTGGACGAAGCTATACATTACGTTAAGTTCTTGAAGAAGCAAGTTCAGACGTTGGAACAAGCAGGAGCTAGTACAGCTGTGGGTTATGGGGTACCTACTAGCTTCAATATGAATAATAATTATTCTACTTTCATAAAGGATTATCACCAACCTTCTCATATGATGGTGGGTAGTTCTATGCAAATGTTAAGCTGA 744 0.4449 MDVDDRGMDMMAMMMQMEKFPEFSEPFYPSEPPFSTTTATPNSMPILSNNTINHPPPSNHNPFVANPINPIPQPVTPHLIQPNKDVGFRNNITDNPNACSSSSSSSEKKNSMAAMREMIFRIAVMQPIHIEPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASTAVGYGVPTSFNMNNNYSTFIKDYHQPSHMMVGSSMQMLS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1305 247 FunFam BHLH transcription factor 148 210 - -
Lele56g1305 247 Pfam Helix-loop-helix DNA-binding domain 155 194 IPR011598 GO:0046983
Lele56g1305 247 Gene3D - 144 209 IPR036638 GO:0046983
Lele56g1305 247 SMART finulus 151 200 IPR011598 GO:0046983
Lele56g1305 247 MobiDBLite consensus disorder prediction 89 110 - -
Lele56g1305 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
Lele56g1305 247 Coils Coil 184 204 - -
Lele56g1305 247 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 7 242 IPR045843 GO:0003700|GO:0006355
Lele56g1305 247 CDD bHLH_AtIND_like 146 202 - -
Lele56g1305 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 205 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1305 Lele-ChrLele56 16296058 16296801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1305 1 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 56.579 1.98e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele56g1305 HLH 1.4e-06 No_clan