Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1300 ATGGGGGATTTGTACGGCGTTGGAAAGGGTAACATTATTCCTTCTCCGTCTTCTTCTTCAACCTCACCTCCTGACGATTTTTCCCTTTTTCTGCATCAGATTCTCCTCCCCCCCTCCTCCTTCTCTGCCGTACGACCACCGTCTTCCCTCCTCCTCACCCACATGCCTGAGAACGCACCTAATAACATTTCTGAGCATGAAAATGCTAGCCTTTCGTACCCATCTTCTCTGCTTCAAGACGTAATCTCAGGCGTTGATTCTACCTCTAAAAACCATGCCCTTCTCTCGGCTTATATCAAGGGAGGTTCTGCTGCAAATGTGTCTTCCTCCTCCGTCGGAGTAAGTGGAAATGACACTGATGAGTATGATTGTGAAAGTGAGGGGTGTACGGTTGAAGCAATGGTTGCCAAATCAGTTCCTCCAAGGCGTTCATCGAAGAGAAGCAGAGCTGCTGAAGTTCATAACTTGTCTGAGAAGCGAAGGAGGAGTCGGATCAACGAAAAGCTGAAGGCTTTGCAGAATCTAATTCCAAATTCAAATAAGATGCTTTCTGTGAGAAATGGATCGAATATGCTTCCTGTGTGCTTCCCCGAAGGCTTGCAGACTCTGCACTTGTCTCAGATGAGCGAAGAAGAAGACGGGTCGTTCAATTTTACACTTGTTTTCTTGAATTACAAAGCAGATATGCAGGGACGACATGTTGCAGCACCAGCAATTAAATGCAGAAGATTCAAATACCAACTTTGGGTGATTCTCAAGCTGTACGCGAATTCGAGTCAGGCACGTTGGCTACAGTATCACTCATTTGATAAGCAAAGCAACCGAAGTGAAGGAGAATTGAAAGCATGCATTGCAAGAGATTGA 864 0.4572 MGDLYGVGKGNIIPSPSSSSTSPPDDFSLFLHQILLPPSSFSAVRPPSSLLLTHMPENAPNNISEHENASLSYPSSLLQDVISGVDSTSKNHALLSAYIKGGSAANVSSSSVGVSGNDTDEYDCESEGCTVEAMVAKSVPPRRSSKRSRAAEVHNLSEKRRRSRINEKLKALQNLIPNSNKMLSVRNGSNMLPVCFPEGLQTLHLSQMSEEEDGSFNFTLVFLNYKADMQGRHVAAPAIKCRRFKYQLWVILKLYANSSQARWLQYHSFDKQSNRSEGELKACIARD 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1300 287 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 22 181 IPR031066 -
Lele56g1300 287 MobiDBLite consensus disorder prediction 139 160 - -
Lele56g1300 287 Pfam Helix-loop-helix DNA-binding domain 153 180 IPR011598 GO:0046983
Lele56g1300 287 MobiDBLite consensus disorder prediction 145 160 - -
Lele56g1300 287 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 181 IPR036638 GO:0046983
Lele56g1300 287 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 203 IPR011598 GO:0046983
Lele56g1300 287 Gene3D - 144 191 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1300 Lele-ChrLele56 16262822 16265188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1300 117 208 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 47.934 3.35e-21 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele56g1300 HLH 2.5e-07 No_clan