LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele56g1298	ATGAAGGTTGGGGGAGTGATCGGCTACGACACCCTATGGAACGGCTCTGTTGCCGACCCAACAGAAGTACCTCAAAGGGATTACCTCAAACACTCGCGTGTTTTTGCGTTGGATCTCAACAAGCCCTTGACTCAAGGATTGAGATTTGTCAGCTGCCTATTGGTGATGGGCTTACCCGGTGCCGCCGCATCATCTGATTACTACACCTCAATTGCTTGCATTCATGTTCTCTACTTAATTTCATGGTCTACGGCTCAAATGTTAAGAAATAATAAATTTGGTTGCTGGGATTCTTCTCCATGTTATTCTGCTATTTCAATTGTTATTATAATGAATTTCGTTAACGGAGAAGCTCCGAAATCCAACGCCGAGGGTCAGCATAAAGAAGTTAATCATAAGAGTCTCCTGCAAAGCGATGCTCTTTATCAGTATATATTGGAAACCAGTGTTTATCCAAGAGAGAATGAGTGCTTGAAGGAACTGCGCGACTTGACGGCAAAACACCCTTGGAACTTGATGGCTGTATCAGCTGACGAAGGTCAATTTCTGAACTTGTTGATTAAACTCATGAATGCGAAGAACACCCTTGAAATTGGTGTCTTCACTGGTTACTCTTTACTCGCCACAGCCCTTGCCATTCCAGAAGATGGAAAGATATTGGCTTTGGACGTGAACCGCGCAGATTATGAGTTGGGTTTGCCTGTAATTGAAAAGGCAGGCGTTGCTCATAAGATTGACTTTAGAGAAGGACCTGCTCTTCCTGTTCTTGACGACTTGCTCACTGATGAAAAGAACAAGGGAGCATTCGATTTCATATTTGTGGATGCGGATAAGGACAATTACTTGAACTACCACAAGAGGGCGATTGAGTTGGTGAAGGTTGGGGGAGTGATCGGCTACGACAACACCCTATGGAACGGCTCAGTTGCCGACCCACCAGAAATGCCTCAATTGGATTACATCGAGTATTATCGTGGATTTGTGTTGGAACTCAACAAGGCCTTGGCCCTTGACTCTAGGATTGAGATTTGTCAGCTTCCTGTTGTTACAATGACCTTCGTTAAGGAAGAAGCGCCCAAAACCCAAGCAGCTGGTCAACATAAAGAAGTGAATCATAAGAGTCTCTTACAAAGCGATGCTCTTTATCAGTATATACTGGAAACCAGTGTTTATCCAAGAGAGCCTGAGTGTTTGAAGGAGCTGCGCGACGTGACGACAAAACACCCCTGGAACTTGTTGGCTGTGTCAGCTGACGAAGGTCAATTTCTGAACTTGTTGCTGAAACTCATGAATGCCAAGAACACCATTGAAATTGGTGTTTTTACTGGTTACTCTCTTCTCGCAACAGCCCTTGCCCTTCCAGAAGATGGAAAGATATTGGCTTTGGATGTCAATCGAGCAGATTATGAGTTGGGTTTGCCTGTGATTGAAAAAGCAGGCGTGGCTCATAAGATTGACTTCAAAGAAGGGCCTGCTCTTCCTGTTCTTGACGACTTGCTCACGGATGAAAAGAACAAGGGAGTGTTCGATTTCATATTTGTGGATGCGGATAAGGACAATTACTTGAACTACCACAAGAGGGCGATTGAGTTGGTGAAGGTTGGGGGATTGATCGGCTACGACAACACCCTATGGAACGGCTCTGTTGCCGACCCACCGGAAATGCCTCAATTGGATTACATCAAGTATTATCGTGGCTTTGTGTTGGAGCTCAACAAGGCCTTGGCCCTTGACTCTAGGATTGAGATTTGTCAGCTTCCTATTGGTGATGGCATTACCCTGTGCCGCCGCATCATCTGA	1800	0.4522	MKVGGVIGYDTLWNGSVADPTEVPQRDYLKHSRVFALDLNKPLTQGLRFVSCLLVMGLPGAAASSDYYTSIACIHVLYLISWSTAQMLRNNKFGCWDSSPCYSAISIVIIMNFVNGEAPKSNAEGQHKEVNHKSLLQSDALYQYILETSVYPRENECLKELRDLTAKHPWNLMAVSADEGQFLNLLIKLMNAKNTLEIGVFTGYSLLATALAIPEDGKILALDVNRADYELGLPVIEKAGVAHKIDFREGPALPVLDDLLTDEKNKGAFDFIFVDADKDNYLNYHKRAIELVKVGGVIGYDNTLWNGSVADPPEMPQLDYIEYYRGFVLELNKALALDSRIEICQLPVVTMTFVKEEAPKTQAAGQHKEVNHKSLLQSDALYQYILETSVYPREPECLKELRDVTTKHPWNLLAVSADEGQFLNLLLKLMNAKNTIEIGVFTGYSLLATALALPEDGKILALDVNRADYELGLPVIEKAGVAHKIDFKEGPALPVLDDLLTDEKNKGVFDFIFVDADKDNYLNYHKRAIELVKVGGLIGYDNTLWNGSVADPPEMPQLDYIKYYRGFVLELNKALALDSRIEICQLPIGDGITLCRRII	599

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele56g1298	599	FunFam	Caffeoyl-CoA O-methyltransferase 1	127	354	-	-
	Lele56g1298	599	Gene3D	Vaccinia Virus protein VP39	124	352	IPR029063	-
	Lele56g1298	599	Gene3D	Vaccinia Virus protein VP39	364	599	IPR029063	-
	Lele56g1298	599	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	138	349	IPR029063	-
	Lele56g1298	599	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	378	597	IPR029063	-
	Lele56g1298	599	FunFam	Caffeoyl-CoA O-methyltransferase 1	367	599	-	-
	Lele56g1298	599	PANTHER	O-METHYLTRANSFERASE-RELATED	370	598	-	-
	Lele56g1298	599	CDD	AdoMet_MTases	436	538	-	-
	Lele56g1298	599	ProSiteProfiles	SAM-dependent O-methyltransferase class I-type profile.	374	598	IPR002935	GO:0008171
	Lele56g1298	599	CDD	AdoMet_MTases	196	298	-	-
	Lele56g1298	599	ProSiteProfiles	SAM-dependent O-methyltransferase class I-type profile.	134	358	IPR002935	GO:0008171
	Lele56g1298	599	Pfam	O-methyltransferase	387	598	IPR002935	GO:0008171
	Lele56g1298	599	Pfam	O-methyltransferase	147	349	IPR002935	GO:0008171

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele56g1298	Lele-ChrLele56	16240389	16248548	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele56g1298	366	598	Monolignol Biosynthesis Gene Families	AT4G34050	78.970	5.55e-139	404