Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1296 ATGTGCTCCCATAGCAAATGCAGAGCACCTTCCATTGGCTTTGGCTTCCTCTTTCTTTCACTCTTCTCTTTACTCTTCACCACTTCGTTTGCCTGCTCTAACGGCAATTGCCAGGTTCTGGAGCCATGTTCGGTGGCTACAGATTGCGGGTCAGGTCTCTATTGTGGCAACTGCCCTGCTCTGGGTAGGACTCAACCTGTCTGCACCAGAGGTCAAGCCACCATTCCTACAGCTATAATTAGTGACTTGCCATTCAACAAGTACACGTGGATTGTCACTCACAATTCATTCAGCATCGCTGATGCACCGCCTTTGCCGGGCGTTCAGAGGCTAACACTTTACAATCAAGAAGATACTGTGACTAACCAGTTGAAGAATGGAGTGAGGGGACTGATGTTAGACATGTACGACTTCCAGAATGATATCTGGCTCTGCCATTCTTTCAAGGGGCAATGTTTCAACTTCACTGCCTTTCAACCTGCAATCAATACATTAAAAGAGGTGGAGGCATTCCTTACCGAAAACCCTACGGAGATTGTCACCATTATAATTGAAGACTATGTGCACTCTCCTAAGGGGTTGACTAACCTATTCACTAATGCTGGGCTGGATAAATATTGGTTTCCTTCGTCTAAGATGCCAAAAAAGGGTCAAGATTGGCCCACTGTAGCAGAAATGGTTCAAGCAAATCACCGCCTTCTTGTTTTTACTTCTGTTGCTTCAAAGGAAGCTGAAGAAGGAATAGCTTATCAGTGGAAGTATATGGTTGAAAATGAGTCTCCACTTGTAGAGATGGTGAATGCATGTTACAAAGCTGCAGGGAATGTGCTTCCCAATTTTGTAGCAGTTAATTTTTACATGAGGAGCGATGGAGGTGGTGTTTTTGATATTGTGGATAAAATGAATGGGCACTCATTGTGTGGGTGCAGTACAGTCACCGCTTGCCAGGCTGGAGCGCCTTCTGGTTCTTGCAAGAACATTTCAATACCTAGTACAAATCCAGTGGGCAATGCTGCTGGAAGCTCTGGAAGCTTTAGTGGATCTGTTCAATTCTCTAATTCAGCTTTTGCTTTCTGTCATCCAAATTGGATGCTTCCCCTCTTGTATTTTCCATTTATTTTTGCAGCTTTGTTACAGTTATCATGA 1146 0.4424 MCSHSKCRAPSIGFGFLFLSLFSLLFTTSFACSNGNCQVLEPCSVATDCGSGLYCGNCPALGRTQPVCTRGQATIPTAIISDLPFNKYTWIVTHNSFSIADAPPLPGVQRLTLYNQEDTVTNQLKNGVRGLMLDMYDFQNDIWLCHSFKGQCFNFTAFQPAINTLKEVEAFLTENPTEIVTIIIEDYVHSPKGLTNLFTNAGLDKYWFPSSKMPKKGQDWPTVAEMVQANHRLLVFTSVASKEAEEGIAYQWKYMVENESPLVEMVNACYKAAGNVLPNFVAVNFYMRSDGGGVFDIVDKMNGHSLCGCSTVTACQAGAPSGSCKNISIPSTNPVGNAAGSSGSFSGSVQFSNSAFAFCHPNWMLPLLYFPFIFAALLQLS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1296 381 PANTHER UNCHARACTERIZED 261 316 - -
Lele56g1296 381 Gene3D Phosphatidylinositol (PI) phosphodiesterase 74 301 IPR017946 GO:0006629|GO:0008081
Lele56g1296 381 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 84 192 - -
Lele56g1296 381 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Lele56g1296 381 SUPERFAMILY PLC-like phosphodiesterases 77 306 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1296 Lele-ChrLele56 16222548 16226190 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0299 50 1744524 1751336 Lele56g1296 56 16222548 16226190 CCT
Lele52g0308 52 1812195 1819129 Lele56g1296 56 16222548 16226190 CCT
Lele53g0139 53 1110280 1115550 Lele56g1296 56 16222548 16226190 hybridization
Lele54g0139 54 1176657 1180197 Lele56g1296 56 16222548 16226190 hybridization