Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1295 ATGGCGTCCTCGAAGCCTCTGCCTACCGCGTCTGCTGACGCACCGGACTCTCCCATCGGTCAATCGACAAAGAGAGAGCAAGAAACTGATTATACTCCTAAGGATGTGCAATCGGTTATTGATTCTTTGAAAAATCAAGTTGCTGCTGAGAGGGGTATTTCTATAAAGAAAACAATGGAAGAAAGTAAAGCAAAGCTGGTCGGTGTTACAAACCATCTCTATCAGTTATCAATGGAAAGAAGAACCTGCAGCAGTACTGGTGCACAGAGAAGTCTGGACCTACTGACAAGGAGGCAACAAGATGCAATTGCTATGCACAATGATATTCATGCAAGTAAAGGAGATAAGGAGAGCAATGGCTATCATGAAGAGAACCATGCTTCTACAGCTGTTCTTTTAGGTTCTAATGTAGCTGTAAAAAATGCTGTTCGCCCTGTTAAACTACCTGAAGTAAAAAGATTACCTCCATACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACTGAGGATCAGTCAGTAGTAGGTCGAAGGCGAATTTATTATGATCAAAATGGCGGTGAAACACTTATTTGCAGTGATAGTGAAGAGGAAATAATAGAGGATAAAGAAGAAAGAGAATTTGTAGAATCCGAAGATTATATACTCCGCATGACTGTCAAAAATTTTGGTTTGTCTGATCTTGTTGTGGAATCACTGGCCCAATGTTTTTCTAGAAACGCTTGTGACATTAAGGCAAGATATGAAGTTCTCAGTCGTGAAAATGCCGCAAAGAGTTCCCAAAATGGAAATTCGTTTCTGGACAAGGATCTTGAAGCAGCTCTTGATTCCTTTGACAACCTCTTTTGTCGACGATGTCTTGCTTTTGATTGTAGATTGCATGGTTGTTCACAGGATCTCATCTTCCCTGCTGAGAAACAACCTCCGTGGATGCCTCCTGATGCTGAAAATGAACCCTGTGGACCAAATTGTTTTCAATTGGTGCTGAAGTCTGAAAGATTTGCGAAAGTGACCTCTTCTGCCCTTGGTGATGTTGAAGAGAAATGCTCAAGTGGTTTTGGGGTGCAAAAATTATCTAGGAAGAAGAAGTTGTGTTCTTCATCTGCTAGGAGGCGAATAAAGTGCAGCCGCAGTGAAAGCGCTTCCTCAAATGCAAAGAACATATCTGAGAGTAGTGACTCAGAGAATGACCCAGGACATAATTCTGCTTCGCCTTCTCAGTCAATACCTAAAACTAAAGCTATGGGGAAAAGTGGAGTTAGTAAGAGGAACAGTAAGCGAGTGGCAGAACGTGTTCTAGTTTCCATGCAGAAGAGGCAGAAGAAAACAGTTGCGTCTGATTCTGATTCCATGGGTGAAGCTCTTGATCATTCATCAAATGAGATAGTTCCTGACCCCCCTGTCACAAATGGTGATGAGAACCTGAGGAAAGAAGAGTGTGTAAATGAGAATATATGCAATCAAGAATTCACTGATATTAAATCATGGGAAACTCTTGAAAAAGCCCTTCTAGAGAAAGGGATGGAAATATTTGGAAGAAACAGCTGTTTCATAGCGAGGAATCTCTTAACTGGTCTGAAGACATGTTGGGAGGTTTTCCAATATATAAATTGCAATGAGGGAAAGATGCCAGGTCCTGTTGGTGATGCTGCAAATTCCCTTCTTGAAGGCTATTCTAAGGGTAACAATGAACTGAGACGAAGATCAAGGTTTTTACGTAGAAGAGGAAGAGTCCGTCGATTGAAATATACCTGGAAATCTGCTGCTTATCATTCAATCAGGAAAAGAATTACAGAGAGAAAGGATCAGCCCTGTCGTCAATATAACCCATGCGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGCCAATGCCGAAGTCGACAATGCCCATGCTTTGCTGCAGATAGGGAATGTGATCCTGATGTTTGCAGGAATTGTTGGGTTGGCTGTGGTGATGGCACTCTTGGGATTCCTAGCCAAAGGGGTGATAATTATGAATGTAGGAATATGAAACTTCTTCTCAAGCAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGATGGGGAGCCTTCTTAAAGAACAGTGTTGGGAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCACATAGGGAGGCGGATAAGCGTGGAAAGATATATGATCGTGAGAATTCATCTTTTCTCTTCAATCTGAATGATCAGTTTGTTCTCGATGCTTATCGAAAGGGCGACAAATTGAAGTTTGCCAATCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATAATGGTGGCTGGGGATCACAGGGTAGGCATTTTTGCCAAGGAACGGATTAATGCAGGGGAGGAGCTGTTTTATGATTACCGCTATGAACCAGATAGGGCTCCTGCCTGGGCTCGGAAGCCGGAGGCATCTGGCTCAAAAAAAGAGGATGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2577 0.4261 MASSKPLPTASADAPDSPIGQSTKREQETDYTPKDVQSVIDSLKNQVAAERGISIKKTMEESKAKLVGVTNHLYQLSMERRTCSSTGAQRSLDLLTRRQQDAIAMHNDIHASKGDKESNGYHEENHASTAVLLGSNVAVKNAVRPVKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGETLICSDSEEEIIEDKEEREFVESEDYILRMTVKNFGLSDLVVESLAQCFSRNACDIKARYEVLSRENAAKSSQNGNSFLDKDLEAALDSFDNLFCRRCLAFDCRLHGCSQDLIFPAEKQPPWMPPDAENEPCGPNCFQLVLKSERFAKVTSSALGDVEEKCSSGFGVQKLSRKKKLCSSSARRRIKCSRSESASSNAKNISESSDSENDPGHNSASPSQSIPKTKAMGKSGVSKRNSKRVAERVLVSMQKRQKKTVASDSDSMGEALDHSSNEIVPDPPVTNGDENLRKEECVNENICNQEFTDIKSWETLEKALLEKGMEIFGRNSCFIARNLLTGLKTCWEVFQYINCNEGKMPGPVGDAANSLLEGYSKGNNELRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1295 858 ProSiteProfiles CXC domain profile. 595 694 IPR026489 -
Lele56g1295 858 MobiDBLite consensus disorder prediction 379 415 - -
Lele56g1295 858 Gene3D SET domain 609 826 IPR046341 -
Lele56g1295 858 MobiDBLite consensus disorder prediction 832 851 - -
Lele56g1295 858 SMART CXC_2 643 680 IPR033467 -
Lele56g1295 858 Pfam CXC domain 647 678 IPR041355 -
Lele56g1295 858 MobiDBLite consensus disorder prediction 832 858 - -
Lele56g1295 858 Pfam SET domain 720 823 IPR001214 GO:0005515
Lele56g1295 858 Coils Coil 193 213 - -
Lele56g1295 858 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 856 IPR045318 GO:0006338|GO:0018024
Lele56g1295 858 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 16 858 IPR025778 GO:0031519
Lele56g1295 858 FunFam Putative histone-lysine N-methyltransferase EZH2 609 826 - -
Lele56g1295 858 MobiDBLite consensus disorder prediction 377 472 - -
Lele56g1295 858 ProSiteProfiles SET domain profile. 709 824 IPR001214 GO:0005515
Lele56g1295 858 MobiDBLite consensus disorder prediction 424 447 - -
Lele56g1295 858 MobiDBLite consensus disorder prediction 1 38 - -
Lele56g1295 858 CDD SET_EZH 709 825 - -
Lele56g1295 858 SUPERFAMILY SET domain 583 829 IPR046341 -
Lele56g1295 858 SMART set_7 709 830 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1295 Lele-ChrLele56 16212476 16220481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1295 698 827 C2H2 Transcription Factor Family AT2G23740 27.211 9.70e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele56g1295 SET 4.8e-11 No_clan