Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1294 ATGTGGGATCTTAACGACTCGCCTGATGATCGGATAAACAACAACGAATCAGAAGGCTGTTCTTCACCGAATGATGATAGAGGAAAGCGGGTCGACGGATCTGTTTCCAATTCAAGTTCATCCGCGTTGGTCATGGAGGACGGATCCGCCGATGAAGACGGCGAGGGAATCCGAGGAATATCAGACGGGAAAGATACCAACAACAAGATGAAGATGAAGAAGAATAAAAAGAATAAGCGAAGCAGTAAGATATTCGGGTTCTGTGTGACCCATGAAGAAGCATCCATGGATGGTGGGGAAGTCGCCGAACCCCCCGTAATAACCAGACAGTTCATGCCGGTAGAGGAGGCGGACGACGTCGCCGGCGCCGCCACCAGCTCATCCTTCCCTCGCTCTCACTGGGTGGGCCTAAAATTCGACCAAGCAGAAGCAAACGGCGTAGGCGGCACGAAGTCAGTCGAAGTAGTGTCGCCAACGTCGTCGCTGCCGATGATTAAGAAAAGCCGGCGAGGACCACGGTCGAGAAGCTCCCAGTATAGAGGAGTCACCTTTTACAGAAGAACCGGTCGATGGGAGTCTCACATATGGGATTGTGGAAAACAAGTCTATCTGGGTGGATTTGACACAGCACATGCAGCTGCTCGGTACGTTTATCTGGGTCTATTTGACACCGAGATTGAAGCTGCTAGGGCTTATGACAAAGCAGCCATAAAGTGCAACGGCAAAGACGCCGTCACCAATTTTGATCCCAGCATCTATGAAAATGAGCTTCAATCTGAGTCTCCAGGTAATAACTCTGATCATCACAATCTGGATTTAAGTCTGGGCAATACGACGATGGGCTCAAATAATAATCGTAGTGCTTCGCAATCATTGGTGAATCGGTCACCAGAACAACAAGGGACTAATAGAAGTAACAACATAGAATCTCATCATAGAAGAAGTGGTGGTGGGCACGAGGAGAGTGAAACGCTGCGTCTTCTGAGTCAAACTCATCTTCAATATTCTGACGAAACCCACCACCATAACAGATATGGTCCTTACAAGACTTCTGGACAACAACCTCAAATTCTTCACCATCTCCCACATTTTCACCACCCAAATTATCGGATTCCTAACAGGAGTAATGGAAACGCCGGTCGTTTGGGAAGTGATCTTTCGTTGTCGATGAATGAAGATCAAGAACAACAATGGCAATCTGGGCATTCTCATCATCAATATTTCTCGACTACGACTACTGCTGCAGCATCATCAGGATTCCCACAGCAGATCACAACTACCTCAGAAGCTTGGCTGCAGAAAAATGGGTTCCACGCTTCTCTCATGAGACCCTAA 1335 0.4787 MWDLNDSPDDRINNNESEGCSSPNDDRGKRVDGSVSNSSSSALVMEDGSADEDGEGIRGISDGKDTNNKMKMKKNKKNKRSSKIFGFCVTHEEASMDGGEVAEPPVITRQFMPVEEADDVAGAATSSSFPRSHWVGLKFDQAEANGVGGTKSVEVVSPTSSLPMIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPSIYENELQSESPGNNSDHHNLDLSLGNTTMGSNNNRSASQSLVNRSPEQQGTNRSNNIESHHRRSGGGHEESETLRLLSQTHLQYSDETHHHNRYGPYKTSGQQPQILHHLPHFHHPNYRIPNRSNGNAGRLGSDLSLSMNEDQEQQWQSGHSHHQYFSTTTTAAASSGFPQQITTTSEAWLQKNGFHASLMRP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1294 444 MobiDBLite consensus disorder prediction 51 69 - -
Lele56g1294 444 MobiDBLite consensus disorder prediction 1 77 - -
Lele56g1294 444 CDD AP2 178 251 IPR001471 GO:0003700|GO:0006355
Lele56g1294 444 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 123 215 - -
Lele56g1294 444 ProSiteProfiles AP2/ERF domain profile. 178 249 IPR001471 GO:0003700|GO:0006355
Lele56g1294 444 MobiDBLite consensus disorder prediction 307 321 - -
Lele56g1294 444 Pfam AP2 domain 178 216 IPR001471 GO:0003700|GO:0006355
Lele56g1294 444 SUPERFAMILY DNA-binding domain 216 251 IPR016177 GO:0003677
Lele56g1294 444 SUPERFAMILY DNA-binding domain 177 215 IPR016177 GO:0003677
Lele56g1294 444 MobiDBLite consensus disorder prediction 255 323 - -
Lele56g1294 444 MobiDBLite consensus disorder prediction 255 306 - -
Lele56g1294 444 Gene3D AP2/ERF domain 217 250 IPR036955 GO:0003700|GO:0006355
Lele56g1294 444 Gene3D AP2/ERF domain 177 216 IPR036955 GO:0003700|GO:0006355
Lele56g1294 444 SMART rav1_2 178 255 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1294 Lele-ChrLele56 16192211 16194836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1294 164 444 AP2-EREBP Transcription Factor Family AT4G36920 37.102 2.26e-34 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele56g1294 AP2 1.1e-05 CL0081