Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1289 ATGAAGAACACCAACAATTACACTAAACTCATCCTTCTCCATCCTTATATCCAGAAACAAGGAAGCTCCAATCGGATATGGCTTCTGGCTTTTATCTCTTTCTTCACCTTAGCATTCCTGGGTACGTTAATTTACACTCGTGAATCATCTTCTTCAATCACCAACGTATCCAAAACCTCCATAGTTTCTTCTTCACCTTCTTCCTTTTCTCCTCCGACCACTGGTTCTGGGTTACCGGTCAATGTAATAAACACGCTTTTGCATTATGCTTCAAAGTCCAATGACACATACCATATGCCACACTTAGACCTCAAACCCATCTCCGATGTTCTTCGAAAGTGCTCTTCGCCTTGCAACTTGCTCATTTTCGGCCTCACTCACGAGACCCTCCTCTGGAAAGCACTGAATCACAATGGAAGAACTGTGTTCATCGATGAAAACCGCTATTACGCGGCGTACTATGAAGAATTATACCCTGAAATTGATGCCTACGATGTTCAGTACACAACCAAAAGGAGTGAAATGAAGGAGCTTCTAGGTTCAACGAAAGAACAGGTAACAAAGGAGTGTAAGCCGGTACAAAACTTGCTGTTCTCAGAATGTAAGCTAGGACTCAATGACCTTCCCAACCATGTCTACGAGTTGAGCTGGGATGTGATATTAGTTGACGGGCCACGCGGAGATTGGCCCGACGCGCCGGGAAGGATGGCGGCGATATTCACCGCCGGCGTGCTGGCCAGGAGCAAGAAAGGCGGGAACCCGAAGACGCATGTGTTTGTGCATGACTTTGGTGGAGAAGTAGAGAAGCTTTATGGTAATGAGTTTCTGTGTAAGCAGAATTTGGTGGAAGAAAGTGAAACTCTGGGGCATTACGTGGTTGAAAGGATGGATGAGAACAATGTTCAGTATTGTAAGATTCAGTCTTCTTCTTCTTCTTCTCCATCATCGTCATCAATGGCTTCTTCGTCTTCTTAA 975 0.4492 MKNTNNYTKLILLHPYIQKQGSSNRIWLLAFISFFTLAFLGTLIYTRESSSSITNVSKTSIVSSSPSSFSPPTTGSGLPVNVINTLLHYASKSNDTYHMPHLDLKPISDVLRKCSSPCNLLIFGLTHETLLWKALNHNGRTVFIDENRYYAAYYEELYPEIDAYDVQYTTKRSEMKELLGSTKEQVTKECKPVQNLLFSECKLGLNDLPNHVYELSWDVILVDGPRGDWPDAPGRMAAIFTAGVLARSKKGGNPKTHVFVHDFGGEVEKLYGNEFLCKQNLVEESETLGHYVVERMDENNVQYCKIQSSSSSSPSSSSMASSSS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1289 324 Pfam Polysaccharide biosynthesis 104 290 IPR021148 -
Lele56g1289 324 PANTHER OS11G0490100 PROTEIN 12 304 IPR006514 GO:0045492
Lele56g1289 324 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 78 304 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1289 Lele-ChrLele56 16140560 16141534 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0318 50 1853600 1855441 Lele56g1289 56 16140560 16141534 CCT
Lele51g0312 51 1785612 1786993 Lele56g1289 56 16140560 16141534 CCT
Lele52g0328 52 1932011 1933361 Lele56g1289 56 16140560 16141534 CCT
Lele49g0302 49 1780236 1783428 Lele56g1289 56 16140560 16141534 CCT
Lele53g0146 53 1199051 1200025 Lele56g1289 56 16140560 16141534 hybridization
Lele54g0147 54 1260298 1261275 Lele56g1289 56 16140560 16141534 hybridization