Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1285 ATGGAGCCAGCATCTGCGGATTCAACATCTCAACCTACCAATTCAGCTCCCAATATTGAGCATCATTGCACGAATGTTTCTGGACAAAATGACAACGCCCGTAACCCTGCGCCCTCATCGGCTACTGACAAATCAGCCTCGGTGACGAATCTGAAAATTTCACATTCCTTTGGAGTAAGAAAAGGGAACTCCCAGACTGAAGATACTGGGATGTCAAGTTTTTCTTTCCTTACCAGTGGGCTTGGACGAGTGCTATCAATGCCTTCTGCTCGAAATGAGACTGCTCCTGTCAATTCAGGAGCTGAGAAGCCTAATTTAATTGAATCATTCACCAAAGGGTTAGTTGACTCGTCAAAGACTGCAGTAAAGAAGATGCAGGTGAAGGCACGCCATATTGTCTCTCAAAACAAACGTAGATACCAGGATGAAGAGTTCGATTTGGATCTGGCATACATTACCGAAAATATAATTGCTATGGGATTTCCATCTGGCGATTCCAGCTCTGGAGTTTTCGGATATATTGAGGGTTTCTATCGCAATCACATGGAAGAAGTGATTAGATTTCTCGAGACTCGTCATGAGGGAAAGTACAAAGTATACAATCTTTGCTCGGAGAGGTTGTATGATGCATCACTATTTAAGGGGAAGGCTGCAAGTTTCCCATTTGATGATCATAATTGCCCTCCTATTGAACTTATAGCATCATTTTGTAGAAGTGCATATTCATGGTTAAAGGAGGATATTCAAAATGTGGTAGTTGTTCATTGCAAAGCTGGCATGGGGAGGACAGGGGTGATGATTTGTAGCCTTCTTTTGTTTCTTAAGTTCTTCCCAACTGCTGAGGAGGCCATTAATTGCTTTAACCAGAAAAGATGCATTGATGGGAAAGCTCTAGTTCTTCCTAGTCAGATTAGGTATGTTAAATACTTTGAACGGACTTTAACATACTTCAAAGGAGAAGTTCAGCCTGGACGGAGGTGCATGCTAAGAGGATTTCGGCTTCACAAATGCCCTTATTGGATTAGGCCTTCCATTACGATTTCTGATCATAATGGAATTCTTTTCACCACAAAAAAGCATCCAAAAACAAAGCCGGAAGATTTTTGGATCAGTGCTCCGAAGAAAGGAATTGTAGTATTTGCGTTACCTGGGGAGCCTGGTCTAACTGAGGTGGCTGGGGACTTCAAAATTTATTTTAATGATGGACAAGGAGATTTCTACTGTTGGTTAAATACAACCATGACAGAAAACAGAAAAATCTTGGACGCTTCGGATCTTGATGGTTTTGACAAGAGAAAGATCCCAGCTCCAGGATTTCAGGTCGAAGTAGTAATGGCGGACAATAACGGCACCCTACCTGCTCGGACAAAAGCCAATCCTCCAGCCAGCAAAGGATCTAGTGATAACACAGGCAATGTCGCAGCCTCAGATACGACGCTTGCTTCTGATTCAAGAAAGAGTAAGGTTCCTACAAATGGGGATGATGATGTGTTCTCAGATAGTGAAGGAGAGGAGACCAAAGATTCAGAGAGCAGGGAATCTAAAGCTGCATCTGATGCCGCCACTGCAGACCATGTTGGAACATTGACCTCGGGAACAAAACAGTTGTCACTTCAGAATCAAGAAAGTAAACAAAAGAATGCTTCTGAAGAAGTGTCAAATAGTCCAAAAAGCCAGAAAACTCCCAAGACCCCTAGAAGCGAGTATGCTGGGGCAGATGAAATCAAGGCCATGGCAGCCGATGCTTCAGTTTTTTCTTTTGGAGATGATGAAGATTTTGAAAGTGACTGA 1791 0.4283 MEPASADSTSQPTNSAPNIEHHCTNVSGQNDNARNPAPSSATDKSASVTNLKISHSFGVRKGNSQTEDTGMSSFSFLTSGLGRVLSMPSARNETAPVNSGAEKPNLIESFTKGLVDSSKTAVKKMQVKARHIVSQNKRRYQDEEFDLDLAYITENIIAMGFPSGDSSSGVFGYIEGFYRNHMEEVIRFLETRHEGKYKVYNLCSERLYDASLFKGKAASFPFDDHNCPPIELIASFCRSAYSWLKEDIQNVVVVHCKAGMGRTGVMICSLLLFLKFFPTAEEAINCFNQKRCIDGKALVLPSQIRYVKYFERTLTYFKGEVQPGRRCMLRGFRLHKCPYWIRPSITISDHNGILFTTKKHPKTKPEDFWISAPKKGIVVFALPGEPGLTEVAGDFKIYFNDGQGDFYCWLNTTMTENRKILDASDLDGFDKRKIPAPGFQVEVVMADNNGTLPARTKANPPASKGSSDNTGNVAASDTTLASDSRKSKVPTNGDDDVFSDSEGEETKDSESRESKAASDAATADHVGTLTSGTKQLSLQNQESKQKNASEEVSNSPKSQKTPKTPRSEYAGADEIKAMAADASVFSFGDDEDFESD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1285 596 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 123 320 - -
Lele56g1285 596 MobiDBLite consensus disorder prediction 452 487 - -
Lele56g1285 596 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 291 IPR000387 GO:0016311|GO:0016791
Lele56g1285 596 MobiDBLite consensus disorder prediction 451 573 - -
Lele56g1285 596 CDD PTP_PTEN 148 312 IPR045101 GO:0016791
Lele56g1285 596 Pfam Protein-tyrosine phosphatase 224 276 IPR000242 GO:0004725|GO:0006470
Lele56g1285 596 MobiDBLite consensus disorder prediction 504 519 - -
Lele56g1285 596 ProSiteProfiles C2 tensin-type domain profile. 324 448 IPR014020 -
Lele56g1285 596 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 318 IPR029021 -
Lele56g1285 596 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 115 562 - -
Lele56g1285 596 SMART PTEN_C2_2 322 447 IPR014020 -
Lele56g1285 596 MobiDBLite consensus disorder prediction 1 48 - -
Lele56g1285 596 MobiDBLite consensus disorder prediction 524 565 - -
Lele56g1285 596 ProSiteProfiles Phosphatase tensin-type domain profile. 138 317 IPR029023 -
Lele56g1285 596 Gene3D Protein tyrosine phosphatase superfamily 123 320 IPR029021 -
Lele56g1285 596 ProSitePatterns Tyrosine specific protein phosphatases active site. 254 264 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1285 Lele-ChrLele56 16111659 16116777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1285 27 596 Protein tyrosine phosphatase (PTP) family AT3G19420 61.102 0.0 714