Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1284 ATGCAGACATCGAATACGAATCCTATCATTTCCACTCTCTCCTCCTTCGTCCTTGGCTCCTTGCACTGTTTCCTGACGCTTTGCTTTGTCCTTCTTCTCCTCTCATTCTCACTTAGTTCTTCTTGTTCGGGCGGTCGGGCCTGCGAACTAGGTATTAGCAGCTCTCTCCCTCTCTCTGTTTCTTTGTTGGCTCTGTCTTTTCTGCTCGGAGCTTGCCAGCTAGCTCTGACTTTAGCCTTTTCTCCCTGCTTCTTGGCATCCTCTGCTTTATTGTTGAATTTGTCGGTCTTATGCAAAGCTAAGTTATTTGATCGTTTATATGAATGTTTAAGTCATGATAAAAAGGTCGGGTCTAATTTGAGTGATCCAGCAAAGAGGTCCCATGAGACATTGGTTGCACTTCTAAAGACGTTTACAAAGCAGGATGATTTAAAGTTTATTGATACCATCATGCGACGCCATTCTAATCAAGACCTATTTGAGCTAGTCAATGATAAGTCTCATGACATCCCTGAGCAGGTTGATTCATATGTTAAGCATGTCTCAACACTGCAATTAAACCCAATTTTAGTACCCAACATACAGGAGACTAGGCTTGTCCAAAAAACTTTGCAGCACCCATGGTATCCATTGGATTATACTTTTGGAGAACTTGTTGAGGTTGCAAGGTTGCTGGAATTTACCAAGATGGTTGCTATTGATTGTGAAATGGTTCTCTGTGAGGATGGGACTGAAGCAGTAGTGAGTGTTTGTGTGGTTGACTGTGATTTGAAGGTTAAACTTAAAAAACTTGTACCACCAAACAAAGCAATTGCTGACTACAGATCAGATATTACTGGTGTCTGTCCTCAGGATCTCGAAGGTGTTACTTGCTCATTGGCTAACATACAGATGTTAATGGATGGAACAATACTAGTGGGACATAGTTTGCATAATGATCTACGTGATGGCAATATTCACAGGAGACCTTCTTTGAATGCTTTATGTAAGGCAAGTTCTGAACTTCGGCACACAGGTGCTCCACATAATTGTCTTAATGATGCAATGGCGGCCATGAAACTTGTTCTTGCTAAGATAGAGCGTGGTGTCCTCGTTGAACAAAAGGATTACGAAATTTCCATATTGAATAAAATGGTATCCTCGTTGAACAAGAAATTAAAGAAATGA 1167 0.4113 MQTSNTNPIISTLSSFVLGSLHCFLTLCFVLLLLSFSLSSSCSGGRACELGISSSLPLSVSLLALSFLLGACQLALTLAFSPCFLASSALLLNLSVLCKAKLFDRLYECLSHDKKVGSNLSDPAKRSHETLVALLKTFTKQDDLKFIDTIMRRHSNQDLFELVNDKSHDIPEQVDSYVKHVSTLQLNPILVPNIQETRLVQKTLQHPWYPLDYTFGELVEVARLLEFTKMVAIDCEMVLCEDGTEAVVSVCVVDCDLKVKLKKLVPPNKAIADYRSDITGVCPQDLEGVTCSLANIQMLMDGTILVGHSLHNDLRDGNIHRRPSLNALCKASSELRHTGAPHNCLNDAMAAMKLVLAKIERGVLVEQKDYEISILNKMVSSLNKKLKK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1284 388 SMART exoiiiendus 229 364 IPR013520 -
Lele56g1284 388 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 119 315 - -
Lele56g1284 388 Gene3D - 226 372 IPR036397 GO:0003676
Lele56g1284 388 Coils Coil 372 388 - -
Lele56g1284 388 SUPERFAMILY Ribonuclease H-like 230 360 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1284 Lele-ChrLele56 16106842 16110935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1284 229 314 C2H2 Transcription Factor Family AT2G48100 38.384 5.96e-06 45.8