Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1280 ATGAGTCTTCTGTGGAGATTTTTCCCACGTGTTTTTCTTGTTCTTGTTGCTGTAAATCCCTGTTTTGGATTAAACCGAGATGGTGTTTTGTTGCTTTCTTTGAAGTACTCTGTTTCGAATGATCCTCTGTTTGCGCTTGGAAGCTGGAATTACTTGGACGAGACTCCTTGTTCGTGGAACGGAGTTTCATGTCAAGCTGTTTCAGATGCAACGAATTCTTCTTCTGAGAATCGAGTGGTTGGTTTGGCTCTTCCGACTTCTCAGATTCTGGGTTCCATTCCTGACGATCTTGGTTTGATTGAGAATCTTCAAAGTCTCGACCTTTCTAATAATTCTCTCAATGGGTCTCTTCCTTCTACACTTTTCCAGGCTTCAAAGCTTAGGTTTCTTGATTTGTCTGATAATTTGATCTCCGGGGAGATTCCGGATTCCATAGTACAGCTTAGTAATCTTCAGGTTCTTAACCTGTCTGACAATGCATTGGCGGGAGAACTTCCGACCGGTCTTGGACAGATGCAGAATCTAATTGTTGTGTCAGTGAAGAATAATTACTTATCAGGTAGTCTTCCTAGTGGCTTTCGAACGACACAAGTTTTAGATCTATCTTCCAACTTGTTGAACGGATCTCTTCCTTCGGATTTTGGTGGGGACAGTTTCCGATACTTGAACATCTCCTTCAACAAATTTTCCGGGAAAATTCCCGAAGAATTCGCAGAGAAAATCCCCAGTAACTCTACACTTGACCTCTCCTTCAACAAGCTCACCGGAGAGATCCCAGATTCCTCTGTTTTCATGAACCACGATTCGGCTTCATTTTCTGGGAATCCCGATCTTTGCGGAGAAGAAATCGACAATCCATGTCCCGTTTCATCGTCACCATCTCCTTCACCAAATGACACTTTTCCCACATCTCCTCCGGCATTCGCCGCTTTCCCGAAGACAGATTCTCCAGCACCGGAATCAGGACACGGAACTTCTTCGCAGCAAGAGAAGACAGGACTAAGAAGAGGAACAATCATAGGAATCGTCGTAGGCGACATCATAGGCATGGGATTATTAGCTATGATATTCCTATACGTGTACCAATCAAAAAGAAGGAAAACCAAGGACCACGGCCTAAACAAGGAACCTATCCATGGGTCATCATCATCACCGTCGTCGTCGTATGAGTCAAAAGGGTTCAGAAGGTGGTCATGCCTGCGTAAAAAGACCGAAGAAGAGGAAGAATCATCATCAGAAACCACAAGCTCTTATGAGAACGAAGTGGAAGCACAGAGACAAGAAGAATCATCGGAGAACAAAACAGGGACATTGGTGACGGTTGATGGGGAAAAAGAGATGGAGCTGGAGACACTTCTAAAGGCGTCAGCTTTCATACTGGGGGCTACTGGTTCGAGCATAATGTACAAGGCGGTTCTCGAAGACGGTACCGTGTTAGCGGTTCGGAGAATCGGCGAGAGCGGTGTAGGCCGGTTCAAGGACTTCGAGACCCAAATCCGAGTCGTAGCCAAACTGGTTCATCCGAACTTGGTTCGAGTTCGAGGATTCTACTGGGGAAATCAAGAGAAGCTTATAATCTACGACTTCGTTCCCAATGGCAGCCTCGCCAACGTTCGCTACAGGAAAGTGGGTTCCTCGCTTTGCCATGTGCCTTGGGAAGTAAGGCTGAAGATTGCTAGAGGGGTGGCAAGTGGGCTAGCTTACCTCCACGACAAAAAGCACGAGACACCAGTTATAAAGCTGGTGGCTCGGCCCGTATCTTCGGCAGCAAGAGATCCACCTCCTCACGGGATAGCGTTCAAGACATTAAATTTGGGCCTAGCCCAAGCCCAAGCCCTAGTGCTATAA 1848 0.4643 MSLLWRFFPRVFLVLVAVNPCFGLNRDGVLLLSLKYSVSNDPLFALGSWNYLDETPCSWNGVSCQAVSDATNSSSENRVVGLALPTSQILGSIPDDLGLIENLQSLDLSNNSLNGSLPSTLFQASKLRFLDLSDNLISGEIPDSIVQLSNLQVLNLSDNALAGELPTGLGQMQNLIVVSVKNNYLSGSLPSGFRTTQVLDLSSNLLNGSLPSDFGGDSFRYLNISFNKFSGKIPEEFAEKIPSNSTLDLSFNKLTGEIPDSSVFMNHDSASFSGNPDLCGEEIDNPCPVSSSPSPSPNDTFPTSPPAFAAFPKTDSPAPESGHGTSSQQEKTGLRRGTIIGIVVGDIIGMGLLAMIFLYVYQSKRRKTKDHGLNKEPIHGSSSSPSSSYESKGFRRWSCLRKKTEEEEESSSETTSSYENEVEAQRQEESSENKTGTLVTVDGEKEMELETLLKASAFILGATGSSIMYKAVLEDGTVLAVRRIGESGVGRFKDFETQIRVVAKLVHPNLVRVRGFYWGNQEKLIIYDFVPNGSLANVRYRKVGSSLCHVPWEVRLKIARGVASGLAYLHDKKHETPVIKLVARPVSSAARDPPPHGIAFKTLNLGLAQAQALVL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1280 615 Gene3D Ribonuclease Inhibitor 24 193 IPR032675 -
Lele56g1280 615 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 579 - -
Lele56g1280 615 MobiDBLite consensus disorder prediction 377 393 - -
Lele56g1280 615 FunFam Leucine-rich repeat receptor-like protein kinase 194 289 - -
Lele56g1280 615 Gene3D Ribonuclease Inhibitor 194 289 IPR032675 -
Lele56g1280 615 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Lele56g1280 615 MobiDBLite consensus disorder prediction 371 439 - -
Lele56g1280 615 ProSiteProfiles Leucine-rich repeat profile. 126 148 IPR001611 GO:0005515
Lele56g1280 615 SMART LRR_typ_2 100 124 IPR003591 -
Lele56g1280 615 SMART LRR_typ_2 148 172 IPR003591 -
Lele56g1280 615 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Lele56g1280 615 SUPERFAMILY L domain-like 27 280 - -
Lele56g1280 615 PRINTS Leucine-rich repeat signature 148 161 - -
Lele56g1280 615 PRINTS Leucine-rich repeat signature 103 116 - -
Lele56g1280 615 Gene3D Transferase(Phosphotransferase) domain 1 445 589 - -
Lele56g1280 615 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Lele56g1280 615 MobiDBLite consensus disorder prediction 395 410 - -
Lele56g1280 615 Pfam Protein tyrosine and serine/threonine kinase 492 573 IPR001245 GO:0004672|GO:0006468
Lele56g1280 615 MobiDBLite consensus disorder prediction 275 332 - -
Lele56g1280 615 SUPERFAMILY Protein kinase-like (PK-like) 459 570 IPR011009 -
Lele56g1280 615 FunFam Leucine-rich repeat receptor-like protein kinase 24 191 - -
Lele56g1280 615 ProSiteProfiles Protein kinase domain profile. 454 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1280 Lele-ChrLele56 16088345 16091501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1280 11 574 Receptor kinase-like Gene Family AT4G37250 56.401 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele56g1280 PK_Tyr_Ser-Thr 2.3e-07 CL0016