Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1261 ATGGCCACGATTTTCTGTTATCCCCATCAATCCCATTTACATCTACGCCGCCCCGTGTGGTGGTCCTTGCTCTACGTCATCACCGTCAAACAAAGTCCAATTCATCCACTCATTGCTCAAAGTCAGAGTTCTGTGCTAGCCCATACACACACAACAAGAGAAAAAGAGGGAGAGAGACAAATTGGAGGAAGCAAAATGGGAATAGTGGAAGAAGCTCAGAACGTGAACGTTCTTGGATCAGGCACGAGGTTTATAGTTCTTGGTCATGGATTTGGCACGGATCAATCGGTTTGGAAACATCTAGTTCCTCATCTTGTCGACGAGTTTCGCGTCCTTCTCTATGATAATATGGGTGCGGGAACCACTAATCCCGATTACTTTGATTTTGATCGCTACTCCACACTTGAAGGCTACGCCTATGATCTTATCGCCATTTTAGAAGAGCTCCATGTCGATTCCTGCATCTTCGTTGGACACTCTGTTTCCGCCATGATAGGGGCTATTGCTTCCATCACTCGCCCTGATCTATTCTCCAAGATCATCATGATCTCCGCTTCCCCTAGGTACTTGAACGACGTGGATTATTACGGAGGCTTTGAGCAGGAAGATCTGAATCAGTTATTCGATGCAATGGGGGCGAATTACAAAGCGTGGTGCTCAGGGTTCGCTCCTCTGGCGGTGGGCGGGGAGATGGAGTCGGTTGCGGTTCAGGAATTTAGCAGAACATTGTTCAATATGAGACCGGACATAGCGCTAAGCGTGGCAATGACGATTTTCCAAAGCGATATGCGGCAAATTCTAGGGCTCATCACAGTTCCGTGCCATATTCTTCAGAGCGTGAAGGACTTGGCGGTTCCGGTGGTGGTTTCCGAGTACCTCCACCAACACATCGCCGCCGAGTCCATCGTGGAGGTCATGTCGACGGACGGTCATCTGCCGCAGCTAAGCTCGCCGGACGTGGTTATTCCGTTGCTGCTCAAACACATCAGGCACGATATCGTGGCGTGA 1008 0.496 MATIFCYPHQSHLHLRRPVWWSLLYVITVKQSPIHPLIAQSQSSVLAHTHTTREKEGERQIGGSKMGIVEEAQNVNVLGSGTRFIVLGHGFGTDQSVWKHLVPHLVDEFRVLLYDNMGAGTTNPDYFDFDRYSTLEGYAYDLIAILEELHVDSCIFVGHSVSAMIGAIASITRPDLFSKIIMISASPRYLNDVDYYGGFEQEDLNQLFDAMGANYKAWCSGFAPLAVGGEMESVAVQEFSRTLFNMRPDIALSVAMTIFQSDMRQILGLITVPCHILQSVKDLAVPVVVSEYLHQHIAAESIVEVMSTDGHLPQLSSPDVVIPLLLKHIRHDIVA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1261 335 PANTHER ESTERASE-RELATED 71 332 - -
Lele56g1261 335 Gene3D alpha/beta hydrolase 64 335 IPR029058 -
Lele56g1261 335 SUPERFAMILY alpha/beta-Hydrolases 76 330 IPR029058 -
Lele56g1261 335 FunFam probable strigolactone esterase DAD2 65 332 - -
Lele56g1261 335 Pfam Alpha/beta hydrolase family 85 322 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1261 Lele-ChrLele56 15910740 15912010 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0348 50 1994901 1997970 Lele56g1261 56 15910740 15912010 CCT
Lele51g0344 51 1957834 1960771 Lele56g1261 56 15910740 15912010 CCT
Lele52g0353 52 2079784 2082742 Lele56g1261 56 15910740 15912010 CCT
Lele56g1261 56 15910740 15912010 Lele49g0326 49 1925146 1929974 CCT
Lele56g1261 56 15910740 15912010 Lele50g0343 50 1978306 1982916 CCT
Lele56g1261 56 15910740 15912010 Lele51g0339 51 1940149 1945057 CCT
Lele56g1261 56 15910740 15912010 Lele52g0350 52 2063062 2067736 CCT
Lele53g0174 53 1457521 1458461 Lele56g1261 56 15910740 15912010 hybridization