Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1244 ATGGCCATTGGCAATCGCAGCTCCAATAGTAGAATGTTTTTAGTGAGGCAATTAGATTACACATCCAGAAGCGCACTAACTGGTTCTCATGGAGCGCTAGGGGCTGTGGAGAGTGGAGCACAAGAAGAAGGTGCTGCAATGTTTCAACAGCAACAAGAGATTTGTGAGATCATCTTTTCGATGAAGCTTATAAAGCAGATGTTTGCATTCATACTCATAATGGTGGTATTCTCTTTGCTCATTCTAACGTTCTTAAGATTTGATCTTTGTTGCGTCTTTAATAGCTATGAGCAAGAAGAAATGGAGGAATTGGTGTTGCCCTTGTTGGTGCCGTCACATGCATTTGCTGTCCCTCACTTGAAGCGTGAATGTGAAGACAAATTAGAGATGAGTTTACTCACAATAGAAAACGTAGTTGACGTATTTCAGCGTGCATTGCTATGTGATGCTCCACGGTTGACCCTAATTTGTTACCGATTCATCTACAATCTTAAATCTGTTTCAGAGTCTCAAGGTTGGAAGAGAATGAAGCAGAGTCACCCATTTCTGGAAACCGAACTTCTGGAATACATGGCTGTGGAAGAAAATAGAAAGAAGATGAGGAAGAGGAAGAATGAAGAAAGGAAGATCTACATGGAACTGTACGATGCAATGGAAGCACTTGTTCATATCTGCAGAGATGGGTGTCGAACAATTGTCCCACAAGATAAAGAATTAAAAGCAAACGAAACTCCTTGTGGTTATGGAGCTTGCCAGGGGATAGAATTGCTCATTCGTCATTTTGTTGCCTGTAAATTTAGCGTCCCACGTGGTGGTTGCATTCATTGTAAGAGAATGTGGCAATTATTTGAGTTACATTCTCGACTATGTGTTGATCCACTTATCTGTAAAGAGCTTCAAGCAAAAAATATCATATCGAAGAAAGATGACATGAATTGGAAAATATTGGCTCCAAAGATTTTGAGAACAAAGGGTATTGCTGAGGCGCCAATCTTTCAACAGCCATAA 1008 0.4048 MAIGNRSSNSRMFLVRQLDYTSRSALTGSHGALGAVESGAQEEGAAMFQQQQEICEIIFSMKLIKQMFAFILIMVVFSLLILTFLRFDLCCVFNSYEQEEMEELVLPLLVPSHAFAVPHLKRECEDKLEMSLLTIENVVDVFQRALLCDAPRLTLICYRFIYNLKSVSESQGWKRMKQSHPFLETELLEYMAVEENRKKMRKRKNEERKIYMELYDAMEALVHICRDGCRTIVPQDKELKANETPCGYGACQGIELLIRHFVACKFSVPRGGCIHCKRMWQLFELHSRLCVDPLICKELQAKNIISKKDDMNWKILAPKILRTKGIAEAPIFQQP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1244 335 Coils Coil 183 203 - -
Lele56g1244 335 FunFam BTB/POZ and TAZ domain-containing protein 2 205 325 - -
Lele56g1244 335 SUPERFAMILY TAZ domain 201 293 IPR035898 -
Lele56g1244 335 Gene3D - 133 202 - -
Lele56g1244 335 Gene3D TAZ domain 203 319 IPR035898 -
Lele56g1244 335 SMART TAZ_2 208 299 IPR000197 -
Lele56g1244 335 Pfam TAZ zinc finger 216 296 IPR000197 -
Lele56g1244 335 FunFam BTB/POZ and TAZ domain-containing protein 2 134 203 - -
Lele56g1244 335 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 94 330 IPR044513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1244 Lele-ChrLele56 15779303 15784236 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lele56g1244 zf-TAZ 1.2e-10 No_clan