Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1243 ATGAATCTTCATATCTTTATCTTCTTTTATCTCATCTCATTATCTCTATGCCACACGGCCAAGGCCGGGACCAAATCTATCATCAGCTTCAGAACTTTCCATGAATTTCCGCCAAGAAGGATTCTGCACCAACCGTTGTTCCCAGACGATTCTGCTCCACCACCACCCGCCGTTGACTCTCCACCGCCACCGGACACCCCGTCTTCTCCCGATATTCCTTTCTTTCACGAGAATCCTGTAGGACCAACGCCGGATCAGAATCAGCCACCACCGGCGATTCCCAATGGCATCACAGCAGTTCCGAATCCGACGGCAACAACAACAACAACGGCGAGCAAGCCGACGAAGAAGGTTGCAATCGCCATGTCTGTTGGAATTGTGACGCTTGGTATGCTCTCTGCTCTTGCCTTCTTCTTGTACAGACACCGTGTGAAGCACCCCAGTGAAACCCAGAAGCTCGTGAATGGGAATTCTCAGGGGATTAACGAGGATTCTTCGGGGGCCCCACCGTCGAGTTTTCTGTACATTGGTACGGTGGAGCCGACACGAGCTGAATCAGTGAGTGAGCCCGTTGAGTCTAATGGAGGAAACAAGTCGCCTTATCATAAACTAAATCCACCCAAGCGATCCGATCGGTACCGGCCAAGTCCTGAATTGCAGCCATTGCCGCCGCTAACAAAGCCACCAGATGGGAATTACCCGCCGGCGATTTCTTCTTCTTCGTCGTCGGCGTCCGACGAGGAAAGCCACGACATGGCATTTCATACGCCACACGGATCATCGCTGAGCTACGAAGATGGCTACTACACGCCAATTTCGCGCCAGAGTTCTCTGGCAAACGGTAGCCCGACGGTGACTGCGAGGAGTGAGACTCATTCCAATAATTCTCATCCTTTTTCAAAGAGGACATCGCCAAAATCTCGCTTCACTGCTCCTTCACCGGAAGTGAGGCCTGTTATTATACCATCTATAAAGCAGGCTCCTCCTCCTCCACCTCCTCCACCGCCGCCGCCGGAAACTCTATCAGCACCATTTCAGCTTGTACATAAACAAGGGACCTCCGGTGTTTCTAGAAGGCCAAAATTCTCAGCGCCTCCTCCGGCACCAAATTTGACGCATCTCCAGTCAACAACATACTACACACCACAGGACACGTCGAGGACTTCACCTAAACATCCTCCGCCTCCGCCACCGCCTCCTCCACCGCCACCACTGCAAAAAACACCGAGGAAAACAGTGTCTCCGGCAATTGGCGTTCCCTCATCATCTGCATCAAGAAAACAACAGTCCTGGTCTGCAAGTGACGAAACAGCGTCTGTTAAAAGTATAAAAAAAGTCTCAGATTCTGAACATGCTGATGAAAGGCTCGTCGCCTCTTCCGGGAGGACGGAAGCCGATGACGACATGGACGAAGGGAAACCTAAGTTAAAGGCTCTGCATTGGGATAAAGTGCGGGCAACCTCAGATCGTGCTACAGTGTGGGACCAGCTAAAATCAAGCTCTTTTCAATTAAATGAGGACATGATGGAAAGCCTGTTTGGCTGCAACAATTCTACAAATGTGGTTCCAAAAGAAGCGCCTAGAAAACTAGTTCTTCCTCTTCCTCCTGTTAATCAGGAGGAGAAGGTGCTGGATCCGAAGAAGTCACAGAACATAGCTATACTACTTAGGGCACTGAATGTTACAAGAGATGAAGTCTGCGAAGCTCTTTTGGACGGGAATCCTGAAGGTTTGGGTACTGAACTATTTGAAACTCTAGTAAAGATGGCTCCCACTAAGGAAGAAGAGATAAAGCTGAAGAAGTATGATGGTGACCTTTCAAAACTTGGCTCTGCAGAAAGATTTCTTAAGGCAGTGCTTGATATCCCTTTTGCCTTCAAAAGAGTTGAAGCCTTGCTCTACAGAGCTAACTTTGATACTGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTGGAGGCGGCGAGTGAGGAATTGAAGAACAGTCGGTTGTTCCTCAAACTCCTCGAAGCTGTTCTTAGGACAGGAAATAGAATGAATGTCGGCACCAATCGCGGTGATGCTAAAGCTTTTAAACTGGACACACTGCTAAAACTGGTAGACATAAAGGGAACCGATGGTAAGACGACATTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCAGAAGGCGAGGACGGTGATTCTTCGCATGAGAATGTTCAGAAGAAAATGAATTCCAAATTCAATGAGGATGAGTTCAAGAAGCAAGGATTACAGGTTGTGGCTGGACTAGGTAGAGACCTAAGCAATGTGAAGAAAGCAGCAACAATGGACTCAGATGTCTTAAGCAGCTACGTCACGAAGCTCGAAATGGGGCTGGAGAAAGTGAGATCTGTTCTGCAATACGAAAGATCGGAAACGAAAGGGAATTTCTTCAACTCCATGAAGCTATTTTTAAGAGATGCAGAAGAGGAAATTGTTAGGATCAAGGACGACGAAAGAAAGGCTTTATTTCTTGTGAAAGAAGTAACAGAATACTTTCATGGGGATACAGCAAAAGAAGAAGCCCACCCTTTCAGAATCTTCATGATTGTAAGAGACTTTCTGAATATTTTGGATCAAGTTTGCAAAGAAGTGGGAAGAATGCAAGATAGAATCATGGTTGGTGCTGCAAGATCTTTCAGAATAGCTTCAACTGCATCGATACCTGTTCTGAACAAGTACCGGGCAAGACAAGATAGAAGTTCAGATGAAGAGAGTTCATCCCCATAA 2754 0.472 MNLHIFIFFYLISLSLCHTAKAGTKSIISFRTFHEFPPRRILHQPLFPDDSAPPPPAVDSPPPPDTPSSPDIPFFHENPVGPTPDQNQPPPAIPNGITAVPNPTATTTTTASKPTKKVAIAMSVGIVTLGMLSALAFFLYRHRVKHPSETQKLVNGNSQGINEDSSGAPPSSFLYIGTVEPTRAESVSEPVESNGGNKSPYHKLNPPKRSDRYRPSPELQPLPPLTKPPDGNYPPAISSSSSSASDEESHDMAFHTPHGSSLSYEDGYYTPISRQSSLANGSPTVTARSETHSNNSHPFSKRTSPKSRFTAPSPEVRPVIIPSIKQAPPPPPPPPPPPETLSAPFQLVHKQGTSGVSRRPKFSAPPPAPNLTHLQSTTYYTPQDTSRTSPKHPPPPPPPPPPPPLQKTPRKTVSPAIGVPSSSASRKQQSWSASDETASVKSIKKVSDSEHADERLVASSGRTEADDDMDEGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCNNSTNVVPKEAPRKLVLPLPPVNQEEKVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELFETLVKMAPTKEEEIKLKKYDGDLSKLGSAERFLKAVLDIPFAFKRVEALLYRANFDTEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGEDGDSSHENVQKKMNSKFNEDEFKKQGLQVVAGLGRDLSNVKKAATMDSDVLSSYVTKLEMGLEKVRSVLQYERSETKGNFFNSMKLFLRDAEEEIVRIKDDERKALFLVKEVTEYFHGDTAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRIMVGAARSFRIASTASIPVLNKYRARQDRSSDEESSSP 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1243 917 MobiDBLite consensus disorder prediction 150 172 - -
Lele56g1243 917 SMART it6_source 466 881 IPR015425 -
Lele56g1243 917 MobiDBLite consensus disorder prediction 369 387 - -
Lele56g1243 917 MobiDBLite consensus disorder prediction 266 310 - -
Lele56g1243 917 MobiDBLite consensus disorder prediction 233 247 - -
Lele56g1243 917 MobiDBLite consensus disorder prediction 150 472 - -
Lele56g1243 917 MobiDBLite consensus disorder prediction 99 114 - -
Lele56g1243 917 MobiDBLite consensus disorder prediction 217 231 - -
Lele56g1243 917 Gene3D Formin, FH2 domain 472 891 IPR042201 -
Lele56g1243 917 SUPERFAMILY Formin homology 2 domain (FH2 domain) 394 879 - -
Lele56g1243 917 MobiDBLite consensus disorder prediction 323 342 - -
Lele56g1243 917 MobiDBLite consensus disorder prediction 44 114 - -
Lele56g1243 917 Pfam Formin Homology 2 Domain 469 866 IPR015425 -
Lele56g1243 917 PANTHER FORMIN-RELATED 366 911 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele56g1243 917 MobiDBLite consensus disorder prediction 388 409 - -
Lele56g1243 917 ProSiteProfiles Formin homology-2 (FH2) domain profile. 466 892 IPR015425 -
Lele56g1243 917 MobiDBLite consensus disorder prediction 441 472 - -
Lele56g1243 917 MobiDBLite consensus disorder prediction 48 70 - -
Lele56g1243 917 MobiDBLite consensus disorder prediction 83 97 - -
Lele56g1243 917 MobiDBLite consensus disorder prediction 415 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1243 Lele-ChrLele56 15775502 15778832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1243 39 907 FH2 protein (formin) Gene Family AT5G67470 58.862 0.0 876