Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1240 ATGGCCGTAAGGCCCTTCCATTTCACCTTCTCGCCTGATAGATTGTTCTGTCTTCTGCGCGTTCCTCCGTTTTCTTCTTCTGGTTATTATTCTTGTCCTGCTTCTTCCTCCCCGTGGCGTTATAAACTTCCGTTGTCCTCTCGATTGTTTTTCCCTATTTCTGTGTTCCGTCACTTCACGGCGTTGGCTGCAACTCCGTTCTCACGCGCTAGACAGTGCTATCCGCCACCGCAACCACACGCCGACCGCCTGCGGTCTTTGTCTCCATCCAACACTCTGGCGCAGAAGATTGGAAAATCCATTCGCCGACCGGGCGCTGCCTCGAAGGCGAGGGTTTATGCCGATGTTAACGTTGTCCGTCCTAAGGAATATTGGGACTATGAGTCGCTTACCGTCCAGTGGGGGGAGCAAGATGATTATGAGGTTTCGAGGAAGGTGGGAAGGGGGAAATACAGTGAGGTGTTTGAGGGCGTTCACTGCACGGATAATGAAAAGTGCATCATTAAGATTCTGAAGCCAGTGAAGAAGAAGAAGATCAAGAGGGAGATCAAAATATTGCAGAATCTTTGCGGAGGGCCCAATATCGTAAAGTTGCTTGACATTGTTAGAGATCAGCAGTCAAAGACTCCAAGCCTTATTTTTGAATATGTTAACAACACTGATTTTAAAGTGCTCTATCCTACACTGTCAGACTATGACATACGATATTACATTTATGAGATATTAAAGGCCCTGGATTATTGCCATTCACAAGGAATCATGCATCGGGATGTAAAGCCACATAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGACTGGGGGCTTGCAGAATTCTACCAACCTGGTAAAGAATATAATGTTCGAGTTGCCTCAAGATATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTTTAGATTTATGGAGCCTTGGTTGTATGTTTGCCGGCATGATTTTTCGTAAAGAGCCATTCTTTTATGGACACGATAATTATGATCAACTCGTCAAAATCGCAAAAGTACTTGGGACAGATGAATTGTATGCATATTTGAACAAGTACCGGATAGATTTGGACCCGAATCTTGCAGCACTTGTTGGAAGGCATAGTCGGAAGCCATGGACAAAGTTCATTAACGTCGATAATCAACATTTGGCTGTTCCTGAGGCTATTGACTTTGTCGACAAGTTACTGCGATATGATCACCAAGAACGACCCACCGCAAAAGAAGCCATGAGCCATCCTTACTTCAATACTGTTAGAAATGCAGAAAGCAGTCGATCTCGTGTCATTTCTGCTTGA 1326 0.4457 MAVRPFHFTFSPDRLFCLLRVPPFSSSGYYSCPASSSPWRYKLPLSSRLFFPISVFRHFTALAATPFSRARQCYPPPQPHADRLRSLSPSNTLAQKIGKSIRRPGAASKARVYADVNVVRPKEYWDYESLTVQWGEQDDYEVSRKVGRGKYSEVFEGVHCTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYEILKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYQPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELYAYLNKYRIDLDPNLAALVGRHSRKPWTKFINVDNQHLAVPEAIDFVDKLLRYDHQERPTAKEAMSHPYFNTVRNAESSRSRVISA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1240 441 ProSiteProfiles Protein kinase domain profile. 140 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1240 441 FunFam Casein kinase II subunit alpha 126 216 - -
Lele56g1240 441 ProSitePatterns Protein kinases ATP-binding region signature. 146 169 IPR017441 GO:0005524
Lele56g1240 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Lele56g1240 441 SUPERFAMILY Protein kinase-like (PK-like) 113 429 IPR011009 -
Lele56g1240 441 FunFam Casein kinase II subunit alpha 217 428 - -
Lele56g1240 441 PANTHER CASEIN KINASE II SUBUNIT ALPHA 104 434 IPR045216 GO:0004674|GO:0006468
Lele56g1240 441 CDD STKc_CK2_alpha 121 425 IPR045216 GO:0004674|GO:0006468
Lele56g1240 441 SMART serkin_6 140 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1240 441 Gene3D Transferase(Phosphotransferase) domain 1 217 426 - -
Lele56g1240 441 Pfam Protein kinase domain 140 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1240 441 Gene3D Phosphorylase Kinase; domain 1 193 216 - -
Lele56g1240 441 Gene3D Phosphorylase Kinase; domain 1 131 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1240 Lele-ChrLele56 15726447 15732719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1240 138 426 Core Cell Cycle Gene Families AT1G76540 30.380 6.23e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Lele56g1240 Pkinase 7.6e-66 CL0016