Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1191 ATGTTCTCATCATATCATTCATGTGGGGGGGGGGAATCCACTGCACCGGTTGTTGGCGTAACATCTCATAGGCCTGGGGTGGGGTGGGTCCCATTGAATTCCAAAAAGAGAACAGCGCCCCATGATTGCTGCATAGCAAACCGAGCTCTTGCGGTGTTTGCCTTTCGTTGCTTTACTTTCCACTCCCCATCCCATACTCATAATAATGTGGACGTGCATTCCGGATAATATTTACGAAAAGATGAGAGATTGAGGAAGCCTTCTTCACGCCTCACTGACTCATCATCGTCCTTGCTCAGAGAAACTCTCAATTATAACTACACACCTACGCCTCTCACTCTCCGTTGCAGACTTGCTGGCCGCCTCCTCCTCCTCCGGAGCTCTGAAACACGTACCCCAAGCCCCACAAAGATGAGGCTTCTCCTCTTGCTACTCCTCCTCCTCCATCACTCCTCCTCTGCTCCCATGTCTGAGTACCGTGCCCTTCTTTCCCTGAAAGCAGCCATTACCGACGACCCCCACTCTTCTCTCTCCTCCTGGAATACTTCCACCAGTCACTGCACCTGGTCTGGTGTCACCTGCGACTCCCGCCGCCACGTCATTTCTCTTAACTTAACCAGCCTTGACCTCTCCGGCTCATTCTCCAATGATGTTGCTCACCTCCCATTTCTCGCTAATCTCTCCGTAGCTGACAATCAGCTCTCCGGACCCATCCCGCCGGGCATTTCTGTAGTCAGTGGCCTCCGATTCCTCAACCTTTCCAATAATGTGTTTAACGGAACTTTCCCTGCTCAGCTTTCCGAGCTCAATAATCTACAGGTCCTCGACCTTTATAACAACAACATGACAGGAGACCTCCCGCTCGTTGTGACCCAGATGCCGAATCTCCGGCATTTGCATCTCGGAGGGAACTTTTTCGCGGGTCAGATCCCGTCGGAGTATGGGCGGTGGGAACACTTGGAATATTTGGCTGTTTCCGGTAATGAACTAGCCGGCACAATACCGCAGGAGATCGGAAACTTGACGAAGCTCCGGGAGCTTTACATTGGATATTACAACACTTACGACGGCGGTTTACCACCAGAGATTGGCAACTTGTCCGAATTAGTGCGGTTCGACGCGGCAAACTGTGGATTAACAGGCGAGATACCTCCGGAAATCGGGAAGCTACAGAAACTCGATACACTGTTTCTTCAAGTGAATGCGCTGTCAGGGCCTCTGACACCTGAGATTGGGAACTTGAAGAGTTTAAAATCAATGGATTTGTCCAACAATATGCTTGCGGGTGAGATTCCGGAGAGTTTTGCTGAGCTTAAGAACCTGACTCTTTTGAACCTGTTCAGAAACAAGCTTCATGGAGCTATTCCTGAGTTCATTGGTGAACTCCCTTCCTTGGAGGTATTGCAGCTTTGGGAGAATAACTTCACTGGTAGCATTCCTCAGGGTCTGGGGCTGAATGGGAGGCTTGTTCTTGTTGATCTTTCATCTAACAAAATAACCGGTTCTTTGCCTCCTAATATGTGCAATGGGAATCATCTTCAGACTCTAATAACTCTTGGAAATTTCTTGTTTGGTCCTATCCCTGAATCCCTCGGGAAGTGCGAGGCATTAACACGAATTCGCATGGGAGAGAACTTTCTGAACGGTTCAATTCCTAAAGGCCTCTTTGGGCTCCCCAAACTTTCACAGGTTGAACTTCAGGACAATCTTCTCTCAGGGCAATTTCCTGAGGGGGCTTCCTTTTCTGTTAATCTTGGTCAGATTAGTCTATCGAACAACAACCTTTCTGGGCCGTTGCCCCCTTCTATAGGCAACTTTTCCGGCATGCAAAAGCTCCTTCTGGACGGTAACAAATTCTCAGGTCAAATACCTCCTCAGATTGGGAGATTACAGCAGCTTTCGAAGGTAGATTTTAGCCACAACAAGTTCTCGGGCACTATCGCCCCAGAAATCAGTAAATGCAAGTTACTGACATTCGTTGATCTTAGTCGTAACGAGCTTTCCGGTGATATTCCAAACGAATTAACCGGTATGCGGATTCTCAATTACTTGAATCTCTCTAGAAATCACCTTGTTGGCAGCATTCCTTCATCGATATCAAGTATGCAAAGTTTAACCTCTGTTGATTTTTCATATAACAATCTCTCCGGTTTGGTTCCTGGCACTGGCCAATTCAGTTACTTCAACTATACATCTTTCCTCGGCAACCCTGAACTCTGTGGTCCATATTTGGGTCCTTGCAAGGATGGTGTTGCTAATGGTGCTCACCTACCTCATGTTAAAGGTCCATTGTCTTCTTCCTTGAAACTTCTCCTGGTTCTTGGGTTGCTATTATGCTCGATTGCATTTGCAGTTGCAGCAATAATTAAAGCACGATCATTGAAGAAGGCAAGTGAAGCTCGGGCATGGAAGTTAACAGCATTCCAGCGTTTGGATTTCACTGCGGATGACGTTTTAGATTGCTTGAAGGAGGACAATATAATAGGTAAAGGAGGTGCAGGAATTGTTTACAAGGGTGCTATGCCTAATGGTGATCAAGTTGCTGTAAAAAGGTTGCCGGCCATGAGCAGAGGATCTTCCCATGACCATGGTTTCAACGCAGAGATCCAGACATTGGGGAGAATCCGACACAGACACATTGTTAGGTTGTTGGGTTTCTGTTCAAACCATGAAACAAATCTTTTGGTGTATGAATACATGCCCAATGGAAGCCTAGGAGAAGTTCTTCATGGTAAAAAAGGAGGTCATTTGCATTGGGACACAAGGTATAAAATTGCTGTGGAGGCAGCAAAGGGGCTATGTTATCTACACCATGACTGTTCCCCTCTTATTGTTCATCGTGATGTGAAGTCGAACAATATCCTTCTTGACTCCAACTTCGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATCGCCGGTTCATATGGATACATAGCACCAGAATATGCCTACACACTGAAAGTCGATGAGAAAAGCGATGTGTACAGTTTTGGAGTTGTTCTTCTAGAGCTTATAACAGGGAGGAAACCAGTTGGGGAATTTGGTGATGGTGTGGACATAGTGCAATGGGTGAGGAAGATGACAGACTCAAACAAGGAACGAGTTCTGAAAGTTCTTGACCCAAGACTTCCCTCAGTTCCTTTGCACGAGGTGATGCATGTGTTCTATGTGGCAACTTTATGTGTTGTAGAACAAGCAGTAGAGAGACCAACCATGCGTGAAGTGGTTCAAATTCTAACAGAGCTTCCAAAGTCACCTTCTTCTAAACAGGGAGGAGACTTGGCAACCACAGAGTCATCTCTGTCTTCATCAAACCCTCTAGATTCTCCAAAAACAGAACTCAAAGATCATCAGCATCCTCCTCAATCGCCACCACCAGATCTTCTTAGCATTTAA 3438 0.4657 MFSSYHSCGGGESTAPVVGVTSHRPGVGWVPLNSKKRTAPHDCCIANRALAVFAFRCFTFHSPSHTHNNVDVHSGXYLRKDERLRKPSSRLTDSSSSLLRETLNYNYTPTPLTLRCRLAGRLLLLRSSETRTPSPTKMRLLLLLLLLLHHSSSAPMSEYRALLSLKAAITDDPHSSLSSWNTSTSHCTWSGVTCDSRRHVISLNLTSLDLSGSFSNDVAHLPFLANLSVADNQLSGPIPPGISVVSGLRFLNLSNNVFNGTFPAQLSELNNLQVLDLYNNNMTGDLPLVVTQMPNLRHLHLGGNFFAGQIPSEYGRWEHLEYLAVSGNELAGTIPQEIGNLTKLRELYIGYYNTYDGGLPPEIGNLSELVRFDAANCGLTGEIPPEIGKLQKLDTLFLQVNALSGPLTPEIGNLKSLKSMDLSNNMLAGEIPESFAELKNLTLLNLFRNKLHGAIPEFIGELPSLEVLQLWENNFTGSIPQGLGLNGRLVLVDLSSNKITGSLPPNMCNGNHLQTLITLGNFLFGPIPESLGKCEALTRIRMGENFLNGSIPKGLFGLPKLSQVELQDNLLSGQFPEGASFSVNLGQISLSNNNLSGPLPPSIGNFSGMQKLLLDGNKFSGQIPPQIGRLQQLSKVDFSHNKFSGTIAPEISKCKLLTFVDLSRNELSGDIPNELTGMRILNYLNLSRNHLVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGAHLPHVKGPLSSSLKLLLVLGLLLCSIAFAVAAIIKARSLKKASEARAWKLTAFQRLDFTADDVLDCLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKERVLKVLDPRLPSVPLHEVMHVFYVATLCVVEQAVERPTMREVVQILTELPKSPSSKQGGDLATTESSLSSSNPLDSPKTELKDHQHPPQSPPPDLLSI 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1191 1145 Pfam Protein tyrosine and serine/threonine kinase 824 1093 IPR001245 GO:0004672|GO:0006468
Lele56g1191 1145 SUPERFAMILY Protein kinase-like (PK-like) 818 1093 IPR011009 -
Lele56g1191 1145 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 791 899 - -
Lele56g1191 1145 MobiDBLite consensus disorder prediction 1097 1123 - -
Lele56g1191 1145 MobiDBLite consensus disorder prediction 1097 1145 - -
Lele56g1191 1145 SMART LRR_typ_2 558 582 IPR003591 -
Lele56g1191 1145 SMART LRR_typ_2 630 654 IPR003591 -
Lele56g1191 1145 SMART LRR_typ_2 414 437 IPR003591 -
Lele56g1191 1145 SMART LRR_typ_2 702 725 IPR003591 -
Lele56g1191 1145 SMART LRR_typ_2 462 486 IPR003591 -
Lele56g1191 1145 SMART LRR_typ_2 293 317 IPR003591 -
Lele56g1191 1145 Gene3D Ribonuclease Inhibitor 353 486 IPR032675 -
Lele56g1191 1145 Gene3D Ribonuclease Inhibitor 487 751 IPR032675 -
Lele56g1191 1145 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 674 1088 - -
Lele56g1191 1145 Gene3D Transferase(Phosphotransferase) domain 1 900 1114 - -
Lele56g1191 1145 Gene3D Ribonuclease Inhibitor 267 352 IPR032675 -
Lele56g1191 1145 ProSitePatterns Serine/Threonine protein kinases active-site signature. 944 956 IPR008271 GO:0004672|GO:0006468
Lele56g1191 1145 SUPERFAMILY RNI-like 202 524 - -
Lele56g1191 1145 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 900 1110 - -
Lele56g1191 1145 Gene3D Phosphorylase Kinase; domain 1 789 899 - -
Lele56g1191 1145 Pfam Leucine Rich repeats (2 copies) 271 308 IPR025875 -
Lele56g1191 1145 SMART serkin_6 822 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1191 1145 SUPERFAMILY L domain-like 487 747 - -
Lele56g1191 1145 Pfam Leucine rich repeat N-terminal domain 157 195 IPR013210 -
Lele56g1191 1145 Gene3D Ribonuclease Inhibitor 157 266 IPR032675 -
Lele56g1191 1145 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 466 751 - -
Lele56g1191 1145 ProSiteProfiles Protein kinase domain profile. 822 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1191 1145 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 152 214 - -
Lele56g1191 1145 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 215 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1191 Lele-ChrLele56 15375270 15382596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1191 151 1145 Receptor kinase-like Gene Family AT5G65700 81.600 0.0 1625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele56g1191 PK_Tyr_Ser-Thr 3.1e-46 CL0016