Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1185 ATGTCGGTAACAGTAACTGGGTACAGAGATTGGCCTTCTCTCCATGACCCAGATCCAAAAATTGTCACAATCCCAATACAACCACCATCCAATCACCTCCTTCTTCAATCTCATCCCCTCCCAAACCCTAGCTCTTCTTCTGCTTCGACCTCCTGCTGGATCATGTGGAACCCTAGCAGGGATCCTCAGGAAGAAGATGACTCGTGGGAGGTCAGAGCCTTTGCGCAGGACACCACCAACATCATGGGCACCACTTGGCCACCCAGGTCCTACAGCTGCACTTTCTGTCGAAGGGAGTTCCGTTCAGCCCAAGCTCTTGGCGGCCACATGAACGTCCACCGCCGGGACCGTGCCCGTCTCCACCACCACCGCCACCACTCCCACCAACCACCAACGTCTGCTGCTGCTACTGCTTCAGTTCATCACAGCAACAACCTAATCTCACCTCATCATCATCATCAAGATCTTGTTGCAAACAACGGCAGATTTTTTCTCTACCATTTGCCAAGGCCTGACGGGATGGGAAACTTGACTGGTACTAGTAATACTACCAATACTACTAATACTCTTTATTCTTCTTTGAATGCATGTGGAGAATCAGTATCACCTACCACGCTTTACTCCATTATGCCGTACCCTCCAAGCAACTCGGTGTCAACTAGCACCCCCTCCTATGTTTTTCAAGCGGAGCGGCGGCCTGCAGGATTAATCAATTCTTCTCTCTCTGATTCTACGAAAATGGAACAGCCCACAACCTCCTCGTTCGGCTGCAACAGTGGCCACGAGGAGCTTGATCTAGAGCTCCGGCTGGGGCACAGACCACCAGCTAGCGGAAATCACAAACGGTGTTTCTGA 855 0.5135 MSVTVTGYRDWPSLHDPDPKIVTIPIQPPSNHLLLQSHPLPNPSSSSASTSCWIMWNPSRDPQEEDDSWEVRAFAQDTTNIMGTTWPPRSYSCTFCRREFRSAQALGGHMNVHRRDRARLHHHRHHSHQPPTSAAATASVHHSNNLISPHHHHQDLVANNGRFFLYHLPRPDGMGNLTGTSNTTNTTNTLYSSLNACGESVSPTTLYSIMPYPPSNSVSTSTPSYVFQAERRPAGLINSSLSDSTKMEQPTTSSFGCNSGHEELDLELRLGHRPPASGNHKRCF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1185 284 SUPERFAMILY beta-beta-alpha zinc fingers 88 118 IPR036236 -
Lele56g1185 284 Gene3D Classic Zinc Finger 78 146 - -
Lele56g1185 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
Lele56g1185 284 PANTHER OS07G0101800 PROTEIN 63 274 - -
Lele56g1185 284 Pfam C2H2-type zinc finger 91 115 - -
Lele56g1185 284 MobiDBLite consensus disorder prediction 118 139 - -
Lele56g1185 284 MobiDBLite consensus disorder prediction 240 259 - -
Lele56g1185 284 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1185 Lele-ChrLele56 15315787 15316641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1185 55 275 C2H2 Transcription Factor Family AT4G17810 40.000 3.11e-34 120