Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1183 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTTTTCCAAATCTCCACAGACCTAACTTGCACCTTCCTCAGCAGCAGCAGCAACACGATTCCGAAGAAGATGCGCATCGGGCCGATCCCTTTTCCAGCGACGACGGTCCCCACCAAGGCCTCGAGCTCGCCTCCGCCGGACCTGGCGACATCGTGGCCCGTCGACCCCGAGGGCGGCCACCGGGCTCCAAGAACAAGCCTAAACCCCCGGTCATAATAACAAGAGAGAGTGCCAACACCCTCCGAGCTCATATTCTCGAAGTCGCTAACGGTTGCGACGTGTTCGACTGCGTCGCCACCTACGCTCGCCGGAGGCAGCGTGGAATCTGTATTCTATGCGGAAGTGGCACGGTGACGAATGTGACCCTAAGGCAACCTGGGGGTGCTGGAGCTGTAGTGAGTCTGCACGGGAGGTTTGAGATATTGTCGCTGTCGGGATCGTTCCTACCGCCTCCGGCGCCGCCCGGTGCGACCAGCCTTACTATATACTTAGGCGGAGGGCAAGGGCAAGTGGTCGGAGGAAGCGTGGTGGGAGAGCTGAGGGCGGCGGGTCCGGTGATCGTGTTCGCTTCTTCGTTTACGAACGTGGCGTACGAGAGACTTCCGTTGGACGAAGAGGAGCAGGAGCAGCTTCAGATGCAGACACCTGGCTCCGGTCAGGGCGGTTCCGGTGGCGGCGGAGGGAATAACTCGTATCCTGACCCATCTTCCGGTCTACCTTTCTTCAATTTGCCGCTTAATATGCCGCAGCAGCACAATGTTCAGTTGCCGGTCGATGGCTGGACCGGAAACTCCGGTCCGCGTCCATCGTTTTAA 849 0.5901 MAGLDLGTASRFFPNLHRPNLHLPQQQQQHDSEEDAHRADPFSSDDGPHQGLELASAGPGDIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVANGCDVFDCVATYARRRQRGICILCGSGTVTNVTLRQPGGAGAVVSLHGRFEILSLSGSFLPPPAPPGATSLTIYLGGGQGQVVGGSVVGELRAAGPVIVFASSFTNVAYERLPLDEEEQEQLQMQTPGSGQGGSGGGGGNNSYPDPSSGLPFFNLPLNMPQQHNVQLPVDGWTGNSGPRPSF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1183 282 CDD DUF296 93 168 IPR005175 -
Lele56g1183 282 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
Lele56g1183 282 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 237 IPR014476 GO:0003680
Lele56g1183 282 MobiDBLite consensus disorder prediction 217 258 - -
Lele56g1183 282 MobiDBLite consensus disorder prediction 1 82 - -
Lele56g1183 282 PIRSF ESCAROLA 9 282 IPR014476 GO:0003680
Lele56g1183 282 MobiDBLite consensus disorder prediction 219 258 - -
Lele56g1183 282 Gene3D - 92 227 - -
Lele56g1183 282 ProSiteProfiles PPC domain profile profile. 89 225 IPR005175 -
Lele56g1183 282 MobiDBLite consensus disorder prediction 28 44 - -
Lele56g1183 282 FunFam AT-hook motif nuclear-localized protein 92 219 - -
Lele56g1183 282 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1183 Lele-ChrLele56 15283334 15284182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1183 1 282 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.902 3.66e-100 293