Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1155 ATGTCTGACTTTTCTTTTCTCTTTCTTCTCTTCTCTGTCATTACAATTTCTACCATATCTGCAATACCTAATGATCTCATCGACCAAACCTGCAAACAATGTGAGAACCAATCCATGATCTTGAACTACGGCTTATGCTCGACGTCTCTTCAGGTGATTGCTGTTAGCCATGCGGCGAATCTTCAAGGTCTTGCGTTGATCGCCATGGAGCTGGCTCTAGAGAACGCGACCACCACATTCTCCACCATTGAAAAGCTTATGAACACCACAAGTTTCGATGGTGATGATGATGAAGAATGCGACCACCTTGCTTGCTTGAGAGACTGCTTAGAGCTTTACTCTGATGCGGCGTGGAGGATCATGAGTTCCATTGGAGCTTTCTTGTCTGAGAATTATGAGTCCACCAAGACGTGGATGAGCTCCGTCATGGAAGCTGCCTCCACTTGCCAGGGAGGGTTTGCAGAAAAAGGTGAAGTTTCTCCATTGACGAAGCAGAATTACGATCTCTTCCAGTTATGTGGCATTGCTCTTTGTATCATCCAAATGTCTACCCCAGCAACACCTTCTTAA 570 0.4544 MSDFSFLFLLFSVITISTISAIPNDLIDQTCKQCENQSMILNYGLCSTSLQVIAVSHAANLQGLALIAMELALENATTTFSTIEKLMNTTSFDGDDDEECDHLACLRDCLELYSDAAWRIMSSIGAFLSENYESTKTWMSSVMEAASTCQGGFAEKGEVSPLTKQNYDLFQLCGIALCIIQMSTPATPS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1155 189 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 182 IPR006501 GO:0004857
Lele56g1155 189 Pfam Plant invertase/pectin methylesterase inhibitor 25 179 IPR006501 GO:0004857
Lele56g1155 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 182 IPR035513 -
Lele56g1155 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 182 IPR035513 -
Lele56g1155 189 CDD PMEI-Pla_a_1_like 31 182 IPR034088 -
Lele56g1155 189 PANTHER OS02G0537100 PROTEIN 7 182 - -
Lele56g1155 189 FunFam Putative invertase inhibitor 22 183 - -
Lele56g1155 189 SMART PMEI_2 22 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1155 Lele-ChrLele56 15031063 15031632 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0285 53 2342055 2342687 Lele56g1155 56 15031063 15031632 hybridization
Lele54g0282 54 2373968 2374537 Lele56g1155 56 15031063 15031632 hybridization