Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1147 ATGGGTGAGAGCCAAACGAAGAGAACGAAGAAGGCAGGCATTGTTGGAAAGTATGGTACCAGGTATGGTGCTAGTCTTAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAACATAGTAAATATTTCTGTGAATTTTGTGGGAAGTATGCTGTGAAGAGGAAAGCTGTAGGAATATGGGGCTGCAAGGATTGTGGTAAAGTGAAAGCAGGTGGTGCTTACACATTGAATACTGCAAGTGCTGTGACTGTGAGGAGTACCATTCGTAGGTTGAGGGAACAAACTGAGAGTTGA 291 0.433 MGESQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1147 96 TIGRFAM eL43_euk_arch: ribosomal protein eL43 7 95 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lele56g1147 96 Gene3D - 5 96 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lele56g1147 96 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 8 76 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lele56g1147 96 PANTHER ZGC:171772 3 96 - -
Lele56g1147 96 Pfam Ribosomal L37ae protein family 8 92 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lele56g1147 96 SUPERFAMILY Zn-binding ribosomal proteins 14 86 IPR011332 GO:0006412
Lele56g1147 96 FunFam 60S ribosomal protein L37a 6 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1147 Lele-ChrLele56 14922457 14925301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1147 6 96 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 94.505 2.13e-59 175