Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1141 ATGCAGCTCTCAAATTCCACCCTGCTTGGAATTGTTCTGAAAGGCAATGATATTTGTCATAGAGATCTGAAATTGGAGAACACTCTCTTGGATGGAAGTCCGAATCCTCGAGTTAAAATATGTGACTTTGGTTACTCCAAGTCTGCTTTACTTCATTCTCAACCGAAATCAACCGTTGGAACTCCGGCTTACATTGCTCCAGAGGTTCTGTCCCGAAAGGAGTATGATGGAAAGATTGCAGACGTATGGTCCTGTGGTGTGACTTTGTATGTCATGTTAGTTGGAGCATACCCATTTGAAGATCCCGAAGATCCTAGGAATTTCCGAAAGACAATTGAAAGAATAATGAGCGTTCAGTACAGCATACCGGACTATGTACGGGTCTCTGCAGACTGCAGACACCTTCTTTCTCGAATATTTGTTGCCAATCCCGCTAAGAGGACAAGCATAACGGAGATAAAACAGCACCCATGGTTTCTGAAGAACTTGGCGAAGGAGACGGCGAAAGGGAAGGAGGAAGCAGCGAAAGAGCAAGGAAGGCAGAGTGTGGAAGACATAATGCGGATAATACAAGAGGCAAGAACTACAACAGTGGGGCAAGTATCATCCAACGGTGGAGGCGTAATTGGTGGAGGCTCATTGGACGGTGAGGATCTTCAGGCAGATGAGGAACCTGAAGTTGATGTTAGTGGTGACTATGCTCAGAACTAG 711 0.4557 MQLSNSTLLGIVLKGNDICHRDLKLENTLLDGSPNPRVKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIERIMSVQYSIPDYVRVSADCRHLLSRIFVANPAKRTSITEIKQHPWFLKNLAKETAKGKEEAAKEQGRQSVEDIMRIIQEARTTTVGQVSSNGGGVIGGGSLDGEDLQADEEPEVDVSGDYAQN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1141 236 Gene3D Transferase(Phosphotransferase) domain 1 10 167 - -
Lele56g1141 236 Pfam Protein kinase domain 16 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1141 236 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1141 236 SMART serkin_6 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1141 236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Lele56g1141 236 PANTHER SERINE/THREONINE KINASE 15 181 - -
Lele56g1141 236 MobiDBLite consensus disorder prediction 197 236 - -
Lele56g1141 236 SUPERFAMILY Protein kinase-like (PK-like) 13 165 IPR011009 -
Lele56g1141 236 FunFam Serine/threonine-protein kinase SRK2A 8 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1141 Lele-ChrLele56 14878764 14880649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1141 18 164 CBL-interacting serine-threonine protein kinases AT5G10930 43.506 2.55e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele56g1141 Pkinase 1.9e-37 CL0016