Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1139 ATGAATGTTCAGAGTTGTAACGACCCAACGCACGGAACACCCAACGCACGGAACACGTGTTTTTGCACCCAGACAAAGAGAAAGAGAAAAAGAGAGCCTTCTGTTTCTGGTTTGTGTTCGCCGGCAAATATGTCATCCTGCTTGTCGGAGAACTCGGAGGTTTCTGACGTGAAGACGGCGGCCAAGTCGTCGGAGCAGTCAGCCTTCTCTCAGACTTGTAGCCTCTTGAGTCAGTACCTAAAGGAAAAAGGAAGCTTCGGAGATCTTAGTCTCGGAATGAAATGCAACATCAAAGGAACTGGGTCTCATGAGACGATGAAGAACCCTGTTCCGACCAAGACTCCTGTGAATCCCAGTGTGATGAATTCTGCGAGTAAGGAGATTAAATCTCAACAGTTGACAATCTTTTATGGGGGACAAGTTCTTGTGTTTGATGATTTTCCTTCTGAGAAAGCAAAGGAGATCATGTCACTTGCAAGCAAAGGAATCTCCCAATCTCAGAACAGATCTGCTTATAATGTTGCCAGCAATTTGGTTCAAGAACACTCTCAAGCACAACCCAGACCTGTTATTGCTGATCTACCAATTGCAAGAAAAGCTTCACTACACCGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAGAGCTCCATATCAGACAAACAATGCCAAGAAGCCAGCTGAAGACATGCCATGGATGGGCTTGTCTCCTGATTCACCACAAGTCTGA 732 0.4577 MNVQSCNDPTHGTPNARNTCFCTQTKRKRKREPSVSGLCSPANMSSCLSENSEVSDVKTAAKSSEQSAFSQTCSLLSQYLKEKGSFGDLSLGMKCNIKGTGSHETMKNPVPTKTPVNPSVMNSASKEIKSQQLTIFYGGQVLVFDDFPSEKAKEIMSLASKGISQSQNRSAYNVASNLVQEHSQAQPRPVIADLPIARKASLHRFLEKRKDRIAARAPYQTNNAKKPAEDMPWMGLSPDSPQV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1139 243 SMART tify_2 126 161 IPR010399 -
Lele56g1139 243 Pfam tify domain 129 160 IPR010399 -
Lele56g1139 243 Pfam Jas motif 195 220 IPR018467 -
Lele56g1139 243 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 61 227 IPR040390 -
Lele56g1139 243 MobiDBLite consensus disorder prediction 218 243 - -
Lele56g1139 243 ProSiteProfiles Tify domain profile. 126 161 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1139 Lele-ChrLele56 14869643 14871570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1139 68 237 Tify Gene Family AT1G19180 38.696 2.59e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele56g1139 tify 3.9e-19 No_clan