Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1134 ATGGGATCTCTTGTCGCCGTCCCAGTTCTTGACGCTCCGATCTCCTCCGAGTCCGAAATGGCCTGGCACTTTGCGTCTCTTCTTCTATCCCTCGGTCATCCGGCTCATCCCGCCGACCTCGCTTCTCGATGCACTTTTTTCACTGCTTCTCCTGAGCTAGTTGAGTTCCTCTGCTCGATCCCTGAATCTCCCATCTTGTTGACCTCCGATTTCTATGTTACTCTCTCTGCTGTTGCTATAGTCGCTGTTGGACGCTTCGTCTGGGTGACCGATTTTTTTGGTAGCTCTTTTATGCCTAGATTTGGAATCAGAGTTTCCTCGACGGACGGTTGGGGGAATAGCTGTAGAAAACGGAAACGAATGTTTATTTTAGATTCCGATTTTCTTCCCGTGGGAAAAAAAGGGATAAATTATTATTCTGAACATGTAGATGAGTTGGAACCATTGAAGTTGCTTCCTCCTGAGAGAATCAGCGATGATTCTTCAAAGATTATTTTACAGTCACATGGCACTGTAAGCATTGAATTATTCGAAAGTCCAGATCAGTTCAAGGAAGTTAAAATGGAGGAGACTTCCGGAAGTAGGACAAATGTCAATGACGCATTAAAAGATCTTAAATCTACCAATGTGCCTCCGTTGGTCGATGACAGGATTAATGACAATAAAGTAGCTCCGAACATTAGAATAGGTGATAACAAAGTATCCTTGGAATGCAAGCAGACGTCGATGAGTTCCGATAGCATGAAACCTCTTCAAAACATTTTACAGCCATTAAATACTACTGCTTTAGAAATGCCTCCCAAAGGTATTCATGATGAAAAATGTGATGAAGTTAACCATTTGAATGGAAAGTCAATGGCTTTAGATATGAAAAGTATGGACTTTTCCGTGGATCCCCTTTCTTTACAGAAGTTTCCTCAATCCTCTTTGAAGACGAATGCCACGGCCAGCGATGCAACTCTTCCTAATCTGCAAAACATGTCCAAACATTTACCCAATGAAGAGAAACGGAACTTTAGTAGAGGTCAGGCATCAATGGGTAAGGGACAGAAAAAGAATTGCACTGCCGTGCATATCAAGGGAAAAAGGGGGACTTCGATCTCAACGTGTCCTGAGGATCAAAAGGAGCGTAAAGAGCTTCCAACATTTGAATCGTACATTGTAGAAGAGGAAGAAGGCTCAGGTGCTTATGGCATTGTTTACAAGGCAAGGAGGAAGAATGATGGAGCCACGGTTGCCATTAAATGTCCTCATGCTAAAGCTCAAGGGCAACATGTTACTAATGAGCTGAAAGTGCTGGAGCGATTTGGAGGCAAAAACTTTATCATTAAATATGAAGGCAGCTTCAAGAATGGAAATTCTGATTGCTTTGTTCTAGAACATATTGAGCACGACAGGCCTGAGGTGTTAAGGAAAGAAATTGATATTGTTCAACTTCGATGGTATGGTTACTGCATGTTCAGGGCTCTTGCAGCTCTTCACAAGCGGGGAGTATTACACAGAGATGTTAAACCTGGCAATTTCCTCTTCTCCCGTAAGCTTAAGAAAGGCTTCCTTATTGATTTTAATCTTGCAAAGGATCTGCATCAGAAGCCAGGGAATATCACTTCAACAAAATGGAGAAAGTTCCCAAATGTCAATTTTTTGGAAACTGCCAATCATCAGACAACTAATGCCTCCAAGTCGATTTTAGATCCAAAAGACAACAGAAGAAGGACAGGGGTGCAATCAAAGACTAAAAATGACCGAGGTAGTGGGCAGGTAATGAAAAGTCAAGGTGCAGACGGCTCAGGAGTAACTTCAGCAAAGGATGTGACCAGCACAAGAACATCACTTGAAAAGAGACTGAGTTTGGTAAAGCCAAGGAGGAAAGAGTTGATTAGCTTCTTGCAAGAGTTAGGTCCTAATCAAGAAGCATCAAACACTCCCATGAGAAAGCGAGTTCCTGCTCCTCGTAATAAGTTTGAGAGCGAGCATATCTACATCTCTCCCATGCCTTTGAATTCAATTGGCAATGATGCCACTGGTGCTGAATTTCTGAAGAGGAAAGGGAATGGAAAGCAGATAAGAGAAGGTTCTTGTGTGGGAACAAAAGGCTTTCGGGCTCCAGAGGTATTGTTCAGATCACCTCATCAAGGTCCTAAGCTTGATGTCTGGTCTGCCGGGGTATCGTTGCTCTATCTCATAATCGGGAAAGTTCCTTTCACTGGCGATCCTGAACAGAACATAAAGGATATAGCTAAACTTAGAGGCAGTGAGGATCTATGGGAAGTTGCTAAGCTACACAATCGGGAATCCTCATTCCCTGCGGACTTGTACGATAAACACAGTATGCCATCTTTGCGATTACGAGATTGGTGCTTAATGAACACAAAGAGACCAGAGTTCCTAGAAGTCATTCCCAGTTCACTATTTGATCTTGTGGACAAGTGCCTGATGGTGAACCCTAGAGTGAGAATCAGTGCAGAGGAAGCTCTTCAGCATGAGTTTTTTGCACCATGCCATGAAAGCCTGAGGAAGGAGAGGCAATGGGCTCAAAAGTGGAGCTATCAATATGAGCTGGATCGGCTTTAA 2574 0.4324 MGSLVAVPVLDAPISSESEMAWHFASLLLSLGHPAHPADLASRCTFFTASPELVEFLCSIPESPILLTSDFYVTLSAVAIVAVGRFVWVTDFFGSSFMPRFGIRVSSTDGWGNSCRKRKRMFILDSDFLPVGKKGINYYSEHVDELEPLKLLPPERISDDSSKIILQSHGTVSIELFESPDQFKEVKMEETSGSRTNVNDALKDLKSTNVPPLVDDRINDNKVAPNIRIGDNKVSLECKQTSMSSDSMKPLQNILQPLNTTALEMPPKGIHDEKCDEVNHLNGKSMALDMKSMDFSVDPLSLQKFPQSSLKTNATASDATLPNLQNMSKHLPNEEKRNFSRGQASMGKGQKKNCTAVHIKGKRGTSISTCPEDQKERKELPTFESYIVEEEEGSGAYGIVYKARRKNDGATVAIKCPHAKAQGQHVTNELKVLERFGGKNFIIKYEGSFKNGNSDCFVLEHIEHDRPEVLRKEIDIVQLRWYGYCMFRALAALHKRGVLHRDVKPGNFLFSRKLKKGFLIDFNLAKDLHQKPGNITSTKWRKFPNVNFLETANHQTTNASKSILDPKDNRRRTGVQSKTKNDRGSGQVMKSQGADGSGVTSAKDVTSTRTSLEKRLSLVKPRRKELISFLQELGPNQEASNTPMRKRVPAPRNKFESEHIYISPMPLNSIGNDATGAEFLKRKGNGKQIREGSCVGTKGFRAPEVLFRSPHQGPKLDVWSAGVSLLYLIIGKVPFTGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPADLYDKHSMPSLRLRDWCLMNTKRPEFLEVIPSSLFDLVDKCLMVNPRVRISAEEALQHEFFAPCHESLRKERQWAQKWSYQYELDRL 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1134 857 Gene3D Phosphorylase Kinase; domain 1 386 461 - -
Lele56g1134 857 MobiDBLite consensus disorder prediction 579 614 - -
Lele56g1134 857 Gene3D Transferase(Phosphotransferase) domain 1 462 542 - -
Lele56g1134 857 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 335 841 - -
Lele56g1134 857 FunFam Kinase like protein 668 842 - -
Lele56g1134 857 MobiDBLite consensus disorder prediction 564 578 - -
Lele56g1134 857 ProSiteProfiles Protein kinase domain profile. 386 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1134 857 SUPERFAMILY Protein kinase-like (PK-like) 383 840 IPR011009 -
Lele56g1134 857 MobiDBLite consensus disorder prediction 557 614 - -
Lele56g1134 857 SMART serkin_6 386 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1134 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Lele56g1134 857 FunFam Probable serine/threonine-protein kinase DDB_G0291918 378 541 - -
Lele56g1134 857 Pfam Protein kinase domain 388 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1134 857 Pfam Protein kinase domain 692 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1134 857 Gene3D Transferase(Phosphotransferase) domain 1 671 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1134 Lele-ChrLele56 14818034 14824155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1134 386 749 Core Cell Cycle Gene Families AT4G28980 23.684 1.54e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Lele56g1134 Pkinase 8e-18 CL0016