Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1110 ATGACAAGGCGGTGCTCCCATTGCAGCCATAATGGTCACAACTCCAGGACCTGTCCCAACCGTGGAGTGAAGCTATTCGGAGTCCGATTGACTGATGGGTCGATCCGGAAGAGTGCTAGTATGGGCAATCTTAGCCACTATGCCGGTTCGAGTTCCGGGCCCCATCAGACCGGTTGTAACACTCCGGGTTCTCCCGGCGAGACACCTGATCACGGTGCGGTCGCAGACGGTTACGCCTCCGAGGATTTTGTACCTGGGTCGTCTTCAAGTTCACGTGAAAGGAAAAAGGGTGTTCCATGGACTGAGGAGGAACATAGAATGTTTCTACTTGGATTGCAGAAACGAGGCAAAGGTGATTGGCGTGGAATTGCACGAAATTATGTTGTATCAAGGACACCTACTCAAGTAGCCAGCCATGCTCAGAAATACTTCATTAGGCAAAGCAATGTGTCTAGGCGAAAAAGACGATCCAGCTTGTTTGATATTGCTGCAGATGAAGTTAGTGCTCATATTTGCTCATGA 522 0.4981 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYAGSSSGPHQTGCNTPGSPGETPDHGAVADGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKRGKGDWRGIARNYVVSRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIAADEVSAHICS 173
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1110 173 FunFam transcription factor MYB1R1 98 149 - -
Lele56g1110 173 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 95 147 IPR006447 GO:0003677
Lele56g1110 173 CDD SANT 99 144 IPR001005 -
Lele56g1110 173 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Lele56g1110 173 MobiDBLite consensus disorder prediction 41 99 - -
Lele56g1110 173 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
Lele56g1110 173 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Lele56g1110 173 SMART sant 96 146 IPR001005 -
Lele56g1110 173 MobiDBLite consensus disorder prediction 41 64 - -
Lele56g1110 173 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
Lele56g1110 173 Gene3D - 98 150 - -
Lele56g1110 173 MobiDBLite consensus disorder prediction 1 21 - -
Lele56g1110 173 PANTHER TRANSCRIPTION FACTOR KUA1 3 167 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele56g1110 Lele-ChrLele56 14579663 14582426 Dispersed/Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele56g1110 Myb_DNA-binding 4.6e-10 CL0123