Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1087 ATGGACGAATGGCGGGTGGACGTGGGTTGCAACAGTAAACACCTCCACCAGGGGCGTTTTATTCAGCATTGCCCTACAAATGGTGATCCAAACTATGACCTTAAGAGAGTGAAGCCACCCACTGGAATTCCAAGATCCATGCTCATGGCAGCTTCCGATGGTTCTTATGCTTTACCAACTGATGATGTAGCTGTCCTTGAAGCCAAACGATTGATTGAGCATCTCGTTGATCAGCTGATCGATGCTAATTGTCATTTTAAAATTTCCTCCCAGAGGGTGAGGTGCTGGGAGTATCGTCAGCAACCTTCCATTGTACGTGTGACTAGGCCTACTCGCCCTGACAAGGCTCGTCGCTTGGGCTACAAGGCTAAGCAGGGTTATGTGGTTTACCGTGTTCGAGTTCGTAGGGGTGGCAGAAAGAGACCAGTTCCCAAAGGTATTGTATATGGTAAGCCCACAAATCAAGGTGTTACCCAACTGAAATTCCAGAGGAGCAAGAGGTCAGTAGCTGAGGAGCGAGCAGGACGGAAGCTAGGTGGCCTTAGGGTCCTCAATTCTTACTGGGTGAATGAGGACTCAACCTATAAATACTACGAGATTATCCTAGTGGATGTGGCTCACAATGCTATCAGAAATGACCCAAGAATTAACTGGCTCTGCAATCCTGTTCACAAACACAGGGAGCTGCGTGGTCTCACTTCTGCTGGCAAGAAATACAGAGGTCTCCGTGGCAGAGGACACCTCTACCACAAAGCTCGCCCATCCCGTAGGGCTACCTGGAAGAGAAACAACACCCTTTCCCTTCGTCGCTACCGCTGA 819 0.4945 MDEWRVDVGCNSKHLHQGRFIQHCPTNGDPNYDLKRVKPPTGIPRSMLMAASDGSYALPTDDVAVLEAKRLIEHLVDQLIDANCHFKISSQRVRCWEYRQQPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYYEIILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1087 272 Gene3D Ribosomal protein l15e 73 272 IPR024794 GO:0003735|GO:0005840
Lele56g1087 272 FunFam Ribosomal protein L15 76 272 - -
Lele56g1087 272 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 91 263 IPR012678 GO:0003735|GO:0005840|GO:0006412
Lele56g1087 272 Gene3D - 9 54 - -
Lele56g1087 272 PANTHER RIBOSOMAL PROTEIN L15 83 272 IPR000439 GO:0003735|GO:0005840|GO:0006412
Lele56g1087 272 Pfam Ribosomal L15 91 258 IPR000439 GO:0003735|GO:0005840|GO:0006412
Lele56g1087 272 ProSitePatterns Ribosomal protein L15e signature. 114 137 IPR020925 GO:0003735|GO:0005840|GO:0006412
Lele56g1087 272 SMART Ribosomal_L15e_2 67 261 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1087 Lele-ChrLele56 14281831 14286619 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1087 91 272 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.209 3.01e-108 310