Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1073 ATGTCGGATTACAGAGACGAAGATCCTCGTATCCATGGCATCAGAACTAAGATTCGTGTCGTCCCCAATTTTCCCAAGCCCGGTATTATGTTCCAAGACATCACAACTTTATTGCTCGATCCAAAAGCCTTCAAGGACACAATCGATTTGTTCGTTGAACGGTATAAAGGCAAGAACATCTCCGTTGTTGCAGGAATAGAAGCTAGAGGATTTATATTCGGTCCGCCCATTGCACTAGCAATAGGAGCCAAGTTTGTTCCCATGAGGAAACCCAAGAAGTTGCCTGGGAAAGTGATATCACAAGATTATACATTAGAGTATGGAAGAGATCGTATGGAGATGCATGTCGGAGCCATAGAAATCGGCGACCGAGCTTTGGTGGTCGACGACTTGATTGCCACCGGTGGAACTCTATGTGCAGCCATGGATTTATTAGAACGTGTGGGAGCAGAAGTAGTTGAATGTGCATGTGTGATTGAATTACCGGAATTGAAGGGACGTGAGAGATTGAAGGGCAAGCCTTTGTATGTGTTGCTGGAGTATTATCCTGATGCTTGA 558 0.4498 MSDYRDEDPRIHGIRTKIRVVPNFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGKVISQDYTLEYGRDRMEMHVGAIEIGDRALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLKGKPLYVLLEYYPDA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1073 185 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lele56g1073 185 SUPERFAMILY PRTase-like 12 175 IPR029057 -
Lele56g1073 185 TIGRFAM apt: adenine phosphoribosyltransferase 15 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lele56g1073 185 Pfam Phosphoribosyl transferase domain 50 166 IPR000836 -
Lele56g1073 185 Gene3D - 2 181 IPR029057 -
Lele56g1073 185 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 6 180 - -
Lele56g1073 185 CDD PRTases_typeI 48 180 IPR000836 -
Lele56g1073 185 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1073 Lele-ChrLele56 14093774 14097802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1073 7 180 PRT Gene Family AT1G27450 75.862 1.27e-95 273