Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1065 ATGTCATCGTCTTCTACTACTCCCACCGCCACCACTACTACTACGGTTTCTACCTTATCTCAGCTGGACCACTTCCCTCCTTCTTCCGACCAGCTTTGTTATGTCCACTGCAACCTTTGTGACACTGTCCTCGCTGTGAGTGTTCCTTGTACGAGCTTGTTCAAGACAGTGACTGTGCGATGCGGCCATTGCACCAACCTACTTCCCGTGATAGTGAACATCAGAGGGTTGCTTCTGCCATCACCAAATCATCAATTTCACCTCTCTAACTCTTTCTTCTCTCCTCCTCCGTCGTCTCTTAACCTCCTGGAGGAGATGCCAAACTCGTCAAATCACTACTTCTCTACTGTGCCTCCTGCTACTCCTAGGTTTGCAATAGCTGATGAGCTTCCACGCCCACCACTCATAAATAGACCTCCTGAGAAGAGGCAGAGAGTCCCATCTGCTTACAATCGCTTCATCAAGGACGAGATCCAACGCATCAAGTCTGCAAATCCTGATATTACTCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAATTGGGCCCACTTTCCTCACATACACTATGGTCTCATGCCTGATCAGAGTGTGAAGAAGACAAATGTGTGCCAGCAGCAAGGAAAAGAAGACAACGACGTTCGCAGTATCAAAGATGGCCTTTTCTCTTCGTCTAATAATAATAATAATAATAATGTTGGAGATGATTCTACTCAAAGTTGGCTTGCTTCTCGCCTTCATGAGATTTGCTTCATCTCTAGAACTTCCATTGCCAATTTCTTAAGCTTTTCTCGAATTACTCGTATATCTGCTACTCGTTTAAAGTTTGGCTAA 831 0.4573 MSSSSTTPTATTTTTVSTLSQLDHFPPSSDQLCYVHCNLCDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVIVNIRGLLLPSPNHQFHLSNSFFSPPPSSLNLLEEMPNSSNHYFSTVPPATPRFAIADELPRPPLINRPPEKRQRVPSAYNRFIKDEIQRIKSANPDITHREAFSAAAKNWAHFPHIHYGLMPDQSVKKTNVCQQQGKEDNDVRSIKDGLFSSSNNNNNNNVGDDSTQSWLASRLHEICFISRTSIANFLSFSRITRISATRLKFG 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1065 276 FunFam Axial regulator YABBY 136 207 - -
Lele56g1065 276 Pfam YABBY protein 28 191 IPR006780 GO:0007275
Lele56g1065 276 SUPERFAMILY HMG-box 135 185 IPR036910 -
Lele56g1065 276 CDD HMG-box 145 181 - -
Lele56g1065 276 Gene3D High mobility group box domain 136 212 IPR036910 -
Lele56g1065 276 PANTHER PROTEIN YABBY 6-RELATED 5 203 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1065 Lele-ChrLele56 14004574 14009332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1065 39 226 C2C2-YABBY Transcription Factor Family AT4G00180 55.502 2.76e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele56g1065 YABBY 2.2e-67 CL0114