Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1058 ATGCATTTCTCAGACATGGCGAGACTTGGGATTTCTTTGTTACTACTGCTAAATCTCCTCATTTACACACCAGAATCCGCCATAGCCAGACCTTCAAACCCAACAGATTTCATAAAGTCCTCTTGCAGAGCCACTCGTTACCCTGTTCTCTGCGTTCAGTCCCTTTCAAGATATGCAACCGTGATTCATCAAAGCCAGAGACAATTAGTCATCACTGCTCTCTCCGTCAGCATCTCAAGAACTCGATCATGTTCTTCTTTCGTCCACAACCTTGGCCGACCAACAAGAATAAAAAACCCCAGAGAACACAGAGCTGTTCAAGACTGTATCGAGAACATGGCTGATAGCCTGGACCGGCTCCACCAATCGGTTCAGGAGCTGGGCCGAACCGGTCCGGCCGTTGGTCAGGGCTTTGAGTGGCATATGAGCAATGTTCAGACTTGGGTTAGTGCTGCTCTCACAGATCAAGACACATGTCTCGATGGGTTCTCTGATTCTGGTTCAGATGAAAACCTCAAGGCCGCTATTAGAAACAGAGTTGTCAATGTTGCTCAAGTTACTAGTAATGCTCTTGCTTTGATCTCCACTTCAAGGCTTGTTGCTAGTTCAGTGTTTTACTTTCATGTAACAGATCTTCCACTTCCAATTCCATTCCAAGGCTTCTTTCTTAGCTCAGTGACACCATGA 687 0.4614 MHFSDMARLGISLLLLLNLLIYTPESAIARPSNPTDFIKSSCRATRYPVLCVQSLSRYATVIHQSQRQLVITALSVSISRTRSCSSFVHNLGRPTRIKNPREHRAVQDCIENMADSLDRLHQSVQELGRTGPAVGQGFEWHMSNVQTWVSAALTDQDTCLDGFSDSGSDENLKAAIRNRVVNVAQVTSNALALISTSRLVASSVFYFHVTDLPLPIPFQGFFLSSVTP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1058 228 Pfam Plant invertase/pectin methylesterase inhibitor 36 193 IPR006501 GO:0004857
Lele56g1058 228 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 196 IPR035513 -
Lele56g1058 228 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 193 - -
Lele56g1058 228 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 195 IPR035513 -
Lele56g1058 228 CDD PMEI-like_3 40 195 - -
Lele56g1058 228 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 195 IPR006501 GO:0004857
Lele56g1058 228 FunFam Pectin methylesterase inhibitor 1 33 197 - -
Lele56g1058 228 SMART PMEI_2 33 193 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1058 Lele-ChrLele56 13895077 13895968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1058 38 194 Carbohydrate Esterase AT3G14310 32.484 6.45e-24 97.8